| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1981 |
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| Symbol | |
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| ID | 5712975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2094803 |
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| End bp | 2095576 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641267904 |
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| Product | putative branched-chain amino acid transport ATP-binding protein |
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| Protein accession | YP_001533321 |
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| Protein GI | 159044527 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.547444 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAGC CGATCCTCGC TACCCACGGA TTGACCCATG ATTTCGGGCC ATTCCGGGCA
CTTCATGGAG TGTCGCTTGA GGTCGCGCCC GGCACCATGA CCGGGCTGAT CGGCCCCAAT
GGCGCGGGCA AGTCCACGCT CTTCAACGTG CTCACCGGCG CGCTGCGCCC GACTTCCGGC
ACCGTCACCC TGCAAGGCAC CGACATCACC GGCCAGCCGC CCGACGCGCT CTTTCGCGCG
GGGCTCGCCC GCAGCTTCCA GATCCCGCGC CCCTTTGCTC GCATGACCGT GCTCGAAAAC
GTCATGCTGG CCCCCAAGGC CCAGATCGGC GAGCGGGTCT GGGGCGCCTT CCTCAACCCC
CGCGCCATGG CCGCGCAAGA GAACGCGATC CGGCAAAAGG CGATGGAGGT GCTGGAATTC
GTCACCCTCG CCAAGCTCGC CGACCAGGCC GCCGGAGAGA TCTCGGGCGG CCAGATGAAA
CTGCTGGAAC TCGCGCGGGT GCTGATGGGC GATCCGACCC TGATCCTGCT CGACGAGCCC
GCGGCGGGGG TGAACCCGGC GCTGACCGAG GTGCTGATCG ACAAGATCGA GACGCTGAAC
CGAACGGGCA CGACCTTCGT GATCATCGAG CATGACATGG ATTTCGTCAT GCAGCACTGC
ACCCCGGTGA TCGCGTTGGG CCAGGGGCGC GTGATCTTCG AGGGCACGCC GGAACAGGCC
CTGGCCGATC CCGTGCTGCT CGACGCCTAT CTCGGGGCCC AGGCCCATGG CTGA
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| Protein sequence | MAEPILATHG LTHDFGPFRA LHGVSLEVAP GTMTGLIGPN GAGKSTLFNV LTGALRPTSG
TVTLQGTDIT GQPPDALFRA GLARSFQIPR PFARMTVLEN VMLAPKAQIG ERVWGAFLNP
RAMAAQENAI RQKAMEVLEF VTLAKLADQA AGEISGGQMK LLELARVLMG DPTLILLDEP
AAGVNPALTE VLIDKIETLN RTGTTFVIIE HDMDFVMQHC TPVIALGQGR VIFEGTPEQA
LADPVLLDAY LGAQAHG
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