| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1980 |
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| Symbol | |
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| ID | 5712974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2094088 |
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| End bp | 2094810 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641267903 |
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| Product | putative high-affinity branched-chain amino acid transport ATP-binding protein |
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| Protein accession | YP_001533320 |
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| Protein GI | 159044526 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.681741 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGACG CGCTCACCAT CACCGACCTG GTCGCGGGCT ATCGCCCCGG CCTGCCGATC
CTGCACGGCG TGTCCCTGCG CGCCCGCGCC GCCAGGGTCA CAGTGATCAT CGGCCCGAAC
GGGGCGGGCA AATCCACCCT GATCAAGGCC ATCGCGGGCC TCGTGCCGGT CACCTCCGGC
ACCATCGCCG CCGAGACCGA GATCACCGGC CTGCGCCCGG ACCTTCTGGC GCGCCACGGC
ATCGCCTATG TCCCCCAGTC CGACAACATC TTCCGCACGC TCACGGTGCG CGAGAACCTC
GACCTGGTGC TGCGCCACGT GCGCGCCGAC GCCCCCGCCC GCCGCGCGGG GCTGCTCGAT
CAGTTCCCGG TGCTGGCCGA CAAGCTCGGC GACAAGGCCG GGGCGCTCTC GGGCGGGCAG
CGGCAATTCC TCGCCGTGGC CATGGCGCTG GCCACCGCCC CGAGCGTGAT CCTGATGGAC
GAGCCGTCTG CGGGCCTCGC GCCCAAGGCG GCCCAGGAGG TGCTGGAACA CGCCCGTGCG
CTGACCGAGA CCGGGGTGAC GATCCTGCTG GTGGAACAGA ACGTCAAACA GGCCCTGCGC
CTGTCGGATC ACTGCTACAT CCTCGCCGAT GGCCGCAACC AGATCGACGG CCCGGCGGCC
GACCTGCTGG ACGATCCGGT GGTGGGCCAG ATCTATCTCG GCGGCAAACG GGTGGCTTCA
TGA
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| Protein sequence | MADALTITDL VAGYRPGLPI LHGVSLRARA ARVTVIIGPN GAGKSTLIKA IAGLVPVTSG
TIAAETEITG LRPDLLARHG IAYVPQSDNI FRTLTVRENL DLVLRHVRAD APARRAGLLD
QFPVLADKLG DKAGALSGGQ RQFLAVAMAL ATAPSVILMD EPSAGLAPKA AQEVLEHARA
LTETGVTILL VEQNVKQALR LSDHCYILAD GRNQIDGPAA DLLDDPVVGQ IYLGGKRVAS
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