| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1978 |
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| Symbol | |
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| ID | 5712972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2092224 |
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| End bp | 2093177 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641267901 |
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| Product | putative branched-chain amino acid transport system / permease component |
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| Protein accession | YP_001533318 |
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| Protein GI | 159044524 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.58235 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.904643 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGGGC TGGTGTCCTA CCTGGTGTTC TTCGCGACCA TCGCCAGCAT CCTGGCGATC
GCGGTGCTGG GGCTGAACCT GCACTGGGGC AATACGGGGC TTTTCAACGG GGGCGTCGTG
GCCTTCTTCG GGGCGGGCGG CTACGCCACG CTGATCCTCG GCGGCACGCC CCAGGCGGCG
CATCTCGGCG GCTTCGGGCT GCCCTACGGG CTGGCGCTGC TCGGCGGGCT CGTGATCGCG
GGCCTCCTCG CCTGGCTCGT CGGGTTGCTG ACCATCCGGC TCAGGCATGA CTACCTCGCC
ATCGCCACCT TCGGGGTCGC GGTCGCCTTC GAGAACCTGG TGCGCAACGC GCAAAGATTG
GCCGGCGGCG CCTCGGGCCT GCGGGGGTTC GAGCGTCCGC TCGCCGACAC GATCCCGCCG
GGGCTGGCCT ATAACGCGGC CTTCTTCGCC TTCGTGCTCG CCGCCCTGAT CGCCACCTAT
CTCGGGCTCG AGCGCCTGAT CCGCGGCCCG TTCGGACGGC TGCTGCGCGC GATCCGCGAG
GATGAAACAG CCGCTCGGGC CCTTGGCAAA TCCCCCGACC GGATCCGCCT GACCGCCTTC
GTGATCGGCT CGGTGATCCT GGGGCTGGCG GGCGCGCTCT ATGCCACCTT CTACGCCTTC
ATCAGTCCGC AGGATGTCCT GCCGATCCTG ACCTTCCAGA TCTGGGCGAT GCTGATCGTC
GGCGGTGCCG GCAACAATCG CGGCGCCATC GCGGGGGCGT TCCTGATCTG GGGCGCCTGG
ACCGCCAGCG GATGGGCGCT GTCGCGCTTC GCACCGATCG AGGTCCAGCT TTACACTGGA
TCGATCCAGT TCGTGCTGAT CGGATGCGTC ATCGTGGGCA TGTTGCTCTG GCGGCCCCAA
GGCCTCTTCC CAGAGCGGCT GGTTGTGTCA CAATCCGGCC AAACCGACAG ATAA
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| Protein sequence | MIGLVSYLVF FATIASILAI AVLGLNLHWG NTGLFNGGVV AFFGAGGYAT LILGGTPQAA
HLGGFGLPYG LALLGGLVIA GLLAWLVGLL TIRLRHDYLA IATFGVAVAF ENLVRNAQRL
AGGASGLRGF ERPLADTIPP GLAYNAAFFA FVLAALIATY LGLERLIRGP FGRLLRAIRE
DETAARALGK SPDRIRLTAF VIGSVILGLA GALYATFYAF ISPQDVLPIL TFQIWAMLIV
GGAGNNRGAI AGAFLIWGAW TASGWALSRF APIEVQLYTG SIQFVLIGCV IVGMLLWRPQ
GLFPERLVVS QSGQTDR
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