| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1976 |
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| Symbol | |
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| ID | 5712970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2089743 |
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| End bp | 2090660 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641267899 |
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| Product | putative ribokinase |
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| Protein accession | YP_001533316 |
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| Protein GI | 159044522 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0524] Sugar kinases, ribokinase family |
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| TIGRFAM ID | [TIGR02152] ribokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.191043 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGCAAAC CGATCGTCAT TCTGGGTATC TTCGTGGCCG ATTGCGCCTT TCGTGCCGCG
CGCCCGCCGC GCATGGGCGA GACCGTTCTG GGCGACAGCT TCGCGCTGAA CCCCGGCGGC
AAGGGCTCCA ACCAGGCCAT CGCCGCGGCG AAATCCGGCG GCGACGCACG GTTTCTGACA
CGCCTCGGGG AGGATGCCTT TGCCGACATG GCCGCGGCGA TCTGGGCCGA GGCGGGGGTG
CGGGCCACCG CGCCGCGCGA TCCGGCCAGC TATACCGGGG CGGCCTATAT CTATGTCGAC
CCGGCGACCG GCGACAACGC GATCATCGTG GCTCCGGGGG CGGCGGCGCT GCTCGGCCCT
GCGGACCTCG ACGCGCAGGC GGAGATGATC GGCGGGGCGG GCGTGTTTCT GACGCAGCTC
GAACAGCCCA TGCCCGCCGC CCGCCGCGGG CTCGAGATCG CCCGCGCTGC CGGTGTCACC
ACGATCCTCA ACCCCGCCCC CGCAGCCCCC CTCGACGACG CGCTGCTGGC GCTTTGCGAT
ATCGTCACGC CGAACGAGAC CGAGGCGGAG GCGCTCACCG GCCACCCCGT CACCGGCCCC
GACGACGCGG TGCGGGCCGC CGATGCCCTG CTGGCGCGGG GCCCGGGGGC TGTGATCGTC
ACCCTCGGCG CGCAGGGCGT TCTCTATCGT AGCGCCACGC AGACCATCCA CCAGCCCGCC
TTCACCCCTG GGCCGGTGGT CGAGACCACG GGCGCGGGCG ATGCGTTCAA CGGGGCGCTG
GCGACGGCCC TGGCCGAGGG ACAGGACACC GCCTCGGCCC TGCGCTTCGG CTGCGCGACC
GCGTCGATCT CGGTCACCCG TCCCGGCGCG GGGCCGTCCA TGCCGAGCCG CGCCGAGATC
GACGCCCTGC TGGCCTGA
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| Protein sequence | MGKPIVILGI FVADCAFRAA RPPRMGETVL GDSFALNPGG KGSNQAIAAA KSGGDARFLT
RLGEDAFADM AAAIWAEAGV RATAPRDPAS YTGAAYIYVD PATGDNAIIV APGAAALLGP
ADLDAQAEMI GGAGVFLTQL EQPMPAARRG LEIARAAGVT TILNPAPAAP LDDALLALCD
IVTPNETEAE ALTGHPVTGP DDAVRAADAL LARGPGAVIV TLGAQGVLYR SATQTIHQPA
FTPGPVVETT GAGDAFNGAL ATALAEGQDT ASALRFGCAT ASISVTRPGA GPSMPSRAEI
DALLA
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