Gene Dshi_1973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1973 
Symbol 
ID5712967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2086276 
End bp2087394 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content71% 
IMG OID641267896 
Producthypothetical protein 
Protein accessionYP_001533313 
Protein GI159044519 
COG category[R] General function prediction only 
COG ID[COG0714] MoxR-like ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0367199 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.929244 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTCA ACGCGATGAC AGTTTCCGCG GGCACCGCCC TCGACGTGCT CCGCACCGCC 
TGGGCGGCGC AGCGCGCCGG GCGCCTGACG GCGGCCTACA TGCTCCACGG CGCGCCCGGG
GTCGGCAAAT CCCAGATCGT GGCGCAACTG GCCGAAGAAA TCGGCGCGCG CCTTTTCGAT
CTGCGCCTGA CCACCATCGA GCCGCAGGAT CTGCGCGGCC TGCCCTATTA CGACCACGAC
GCCCGCAAGA CCGTCTGGTA CCGCCCCGAG GACCTGCCGG ACGACCCCGA CGCGCCCTCG
GTGCTGTTTC TCGACGAACT CACCGCCGCG GCGCCCAGCC TGCAACCCAC GGTCTATGGC
CTGCTGCAGG AACGCCGCGT GGGCCAGCAC CGCCTGCCCG ACAGCGTGTT CCTCGTCGCT
GCCGGAAACA CGGTCGAGGA CGGCGCCATC GCCTACGAGA TGGGCAGCGC GCTGTCGGAC
CGGCTGGTGC ATCTGCACGT CACCGCCTCG GCCACCGACT GGCTGGAAAA CTTCGCCGTC
CCCCGCGGCC TGCACCCGGC CGTCATCGCC TTCCTGCGCA GCCGCGGCGA TCTTCTGTCC
ACCGGGGCCG CGGCCCAGGA ACGCGACGAG ATCATCGCCG CCACCCCCCG CGCCTGGGAA
CGGGTCAGCG ACATCCTCCG CGCAGTGCCC GACCGCCGCC AGCGCAACAT CCTCGTGGCC
GGCACCGTGG GCGAGGCGAT CGGCGCCGAA TTCGCCCTCG TGGCCGACGA GGTCGCGGCC
TCGGTCAAGA TCGAGGAGTT GCTCGCCACC GACCGGGGCC GCCGCGCGCC ACTCTATCCC
GACACGATGC ACGGGCTGCA CGCGCTGGTC TACGGGCTGA TCGGCGCGCT GACGGCCCAG
ACCGCGCCGC GCATCATCGA ATGCATGGCC GACCTCGCCA CCCTGCCCGA TGCGCGCCCC
GAGCCGGTCT TCCGCACCCT GCCGCTGGAA GAATTGCGCA CCCACGGGTT CGAGTTGCTG
ATCCAGCAGG CGCTCGCCCG CGACCTCGCC GACGCCTTCC TCGACAGCCC GGTCTATGCC
GACTACGCCC GCGCGCGGGA GGATGCAGGC CTCGCATGA
 
Protein sequence
MALNAMTVSA GTALDVLRTA WAAQRAGRLT AAYMLHGAPG VGKSQIVAQL AEEIGARLFD 
LRLTTIEPQD LRGLPYYDHD ARKTVWYRPE DLPDDPDAPS VLFLDELTAA APSLQPTVYG
LLQERRVGQH RLPDSVFLVA AGNTVEDGAI AYEMGSALSD RLVHLHVTAS ATDWLENFAV
PRGLHPAVIA FLRSRGDLLS TGAAAQERDE IIAATPRAWE RVSDILRAVP DRRQRNILVA
GTVGEAIGAE FALVADEVAA SVKIEELLAT DRGRRAPLYP DTMHGLHALV YGLIGALTAQ
TAPRIIECMA DLATLPDARP EPVFRTLPLE ELRTHGFELL IQQALARDLA DAFLDSPVYA
DYARAREDAG LA