| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1953 |
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| Symbol | |
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| ID | 5712947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2046386 |
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| End bp | 2047312 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641267878 |
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| Product | putative hydrolase |
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| Protein accession | YP_001533295 |
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| Protein GI | 159044501 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3509] Poly(3-hydroxybutyrate) depolymerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0001445 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.00199711 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTGATCG TTTCTACCCC CCTGTCCCGC TGGCTGACCC GGTGCGGCGG CCTTTTGCTG
GCGGGTCTGG TCCTCGTGCT GGGCGCGGCA GGCGCGGAGG CCGCCACCCA GAAGGTCGAG
CGCAAGATCT CCGTCGGCGG GATGGAGCGG TCCTATATCG CCTATGTGCC CGACAGCGCG
CGCTCGGCCG CGGAGGTTCC GGTGCTGTTC GCCTTCCATC CGGGCTTCGG CAGTGCCGAC
GCCTTCAGCG GTCAGATCAA CATCCACCGC GCCCCGGGGG CCGACAGTTT CATCGTGGTC
TATCCGGAGG GGTTTCGGCG GTCGTGGAAC AGCGGCGATT GCTGCGGTCC GGCCATGCGG
CGCGGCATCG ACGACATCAG TTTCGTCAAG GCGATGCTCG AAGATCTCAG GCGGTTCGGC
AATATCAGCC CCAACCGCAA TTTCGCCACC GGGTTTTCCA ACGGGTTTGC CTTCAGCCAA
CACCTGGCCT GCAACCTGCC CGACAGTTTC GCCGCCATTG CAGGCGGCGG CGGGGTCAAG
GACACCAGCA AGCAATGCGC CAACCCCAAA CCGATCTCGG TCATGGTGAT GCACGGGCTG
ATCGACGAGC ATTCGCCCTT TGACGGCGGC CAGAGCAAGA TCGAGCGGGC GGGTTTTCGC
GTCTCGGTCC AGACGGTGGA GACCTTCTGG CAGCGGCAGA ACCGCTGTTC GGGGACGCGC
ACGACCTCCA ACCTGGACGG TGTCAGCTGC ACGACCCATA CCGGCTGCAC CGGCGGCACC
GAGGTGGTGA TCTGCCCGGT CCCCGAGATG GGCCATTGGT GGCCGGGCCA TGAAGGATCG
CGGGCGGGCG AACGCGCCCT CGGACCGTCG CGGGGCGATC TGAACGGGTC GGCGGCGGTG
GTCCGGTTCT TCCGCTCTCA TTTCTGA
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| Protein sequence | MVIVSTPLSR WLTRCGGLLL AGLVLVLGAA GAEAATQKVE RKISVGGMER SYIAYVPDSA
RSAAEVPVLF AFHPGFGSAD AFSGQINIHR APGADSFIVV YPEGFRRSWN SGDCCGPAMR
RGIDDISFVK AMLEDLRRFG NISPNRNFAT GFSNGFAFSQ HLACNLPDSF AAIAGGGGVK
DTSKQCANPK PISVMVMHGL IDEHSPFDGG QSKIERAGFR VSVQTVETFW QRQNRCSGTR
TTSNLDGVSC TTHTGCTGGT EVVICPVPEM GHWWPGHEGS RAGERALGPS RGDLNGSAAV
VRFFRSHF
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