| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1947 |
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| Symbol | rbsA4 |
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| ID | 5712941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2036724 |
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| End bp | 2038268 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641267872 |
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| Product | ribose import ATP-binding protein |
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| Protein accession | YP_001533289 |
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| Protein GI | 159044495 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3845] ABC-type uncharacterized transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0632394 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.000243405 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCGAGA CCAACGGGGC GCGGCCGGTA CTGCGCCTCG ATCAGATCAC CAAGCGCTTC
GGCGCGCTCA CGGCCAACGA TGCGATCAGC TTCGATCTGC ACGCGGGCGA GGTCGTGGCC
CTTCTGGGTG AGAACGGCGC GGGCAAGACC ACGCTGATGA ACATCCTCTT CGGCCACTAC
ACCGCCGATG AAGGCACAGT GGAGGTGTTC GGCCAGACCC TTCCGCCGGG GGTGCCCCGC
GCCGCGCTGG CCGCGGGGGT GGGCATGGTG CACCAGCATT TCACCCTGGC CGACAATCTC
AGCGTGCTCG ACAACGTCAT CCTCGGGACC GTCCCGCTCT GGCGCGCGGG CCTGGGCAGC
GGCGCGGCCC GGCGCAAGCT GCGCGCGCTG GCCGAGGATT TCGGGCTCCA GGTCGACCCG
GAGGCCCGCG TCGGCACGCT CTCGGTGGGC GAACGCCAAA GGGTCGAAAT CCTCAAGGCG
CTCTACCGCG ACGCGCGGAT CCTGATCCTG GACGAGCCGA CCGCCGTGCT GACCCCGCAG
GAGGCCGAGG CGCTCTTTGC GACCCTGCGC CGGGCGGTGG CGCGGGGCAT GTCGGTGATC
TTCATCTCCC ACAAGCTGCA CGAGGTGATG AGCGTGGCCC ATCGCGTCGT GGTGCTGCGC
CACGGCCGCG TCGTCGGCCG GGTCGCCACG GACGAGACCG ACCGCCACGC GCTGGCCGAG
ATGATGGTGG GGGCCGAGAT CACCGCCCCC GCGCCCCGCC CGGCGACCCC CGGCGCGGCC
CTGATGACGC TCGACCGGGT GTGCACCGAC GCCCGGGGCA CCGCCACCGG GCTGCGCGAC
GTGTCGCTGA CCCTGCGCGC GGGCCAGATC ACCGGGCTTG CCGGGGTCTC GGGCAACGGG
CAGGCGGCGC TGGCGGACCT GATCGGCGGG CTTATCGCGC CCGTCGCGGG CGCTCTGCGC
CTCGGCAACG CAGAGGTCGC CGACTGGTCG CCCCGCGCGG CCCTGGCCCA GGGCATCGGC
CGCATCCCCG AGGACCGCCA CAAGACCGGC ACCATCGCCG ATTTCACCCT GACCGAGAAC
GCCATCCTGG AGGCTTACCC CAAGGCGCAA TTCTCCCGCT CGGGCTGGAT GCGCTGGGGC
GCCGCCGAAA GCTTCGCGCG CGACGTGATC GCCAGCTACG ATGTACGCTG CCCGGGGCCG
GAGACGCCCA TCCGGCTGCT GTCGGGCGGC AACATGCAGA AGCTGATCCT CGGTCGCGTG
CTGGAGGACG GCCCCCGCAT CGTGCTCGCC AACCAGCCGG TGCGCGGGCT CGACATCGGC
GCGGTGACCT ATGTGCAGGA GCAGTTGATC GCCGCGCGGG ACGGCGGCGC GGCGGTCCTG
CTGATCTCCG AAGACCTCGA CGAGGTGCTG GCGCTGTCGG ATGTCATCCA CGTCATGTCC
GAGGGGCGGC TCTCGCCAGA GTTTGCGCGC GGCTCCATGA CCCCGGCGCA GCTGGGCGTC
TGGATGGCGG GCGACGGCTT CGCGGAGGAT CCCCATGCGG CTTGA
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| Protein sequence | MTETNGARPV LRLDQITKRF GALTANDAIS FDLHAGEVVA LLGENGAGKT TLMNILFGHY
TADEGTVEVF GQTLPPGVPR AALAAGVGMV HQHFTLADNL SVLDNVILGT VPLWRAGLGS
GAARRKLRAL AEDFGLQVDP EARVGTLSVG ERQRVEILKA LYRDARILIL DEPTAVLTPQ
EAEALFATLR RAVARGMSVI FISHKLHEVM SVAHRVVVLR HGRVVGRVAT DETDRHALAE
MMVGAEITAP APRPATPGAA LMTLDRVCTD ARGTATGLRD VSLTLRAGQI TGLAGVSGNG
QAALADLIGG LIAPVAGALR LGNAEVADWS PRAALAQGIG RIPEDRHKTG TIADFTLTEN
AILEAYPKAQ FSRSGWMRWG AAESFARDVI ASYDVRCPGP ETPIRLLSGG NMQKLILGRV
LEDGPRIVLA NQPVRGLDIG AVTYVQEQLI AARDGGAAVL LISEDLDEVL ALSDVIHVMS
EGRLSPEFAR GSMTPAQLGV WMAGDGFAED PHAA
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