| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1943 |
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| Symbol | codA |
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| ID | 5712937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2032700 |
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| End bp | 2033968 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641267868 |
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| Product | cytosine deaminase |
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| Protein accession | YP_001533285 |
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| Protein GI | 159044491 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.115146 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0000891161 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTCGACA TTCTGGTCAA GGGCGGCACG CTGCCCGACG GCACCCAGGC CGATATCGCC
ATCACCGGCG ACCGCATCGT CGACGTCGCG CCCGGGATCG CCGCCAAGGC GGGCGAGGTG
ATCGACGCCA CCGGCGATCT GGTCAGCCCG CCCTTCGTGG ACCCCCATTT CCACATGGAC
GCCACGCTCA GCTACGGCAT ACCGCGGATC AACGCCTCGG GCACGCTGCT CGAAGGGATC
GCGCTCTGGG GCGAGTTGAA GCACGAGACG ACCATCGACG CGATGATCGA CCGCGCCCTG
CGCTATTGCG ACTGGGCGGT CTCCATGGGG CTGCTGGCGA TCCGCTCCCA TGTCGATACC
TGCGACGACA GCCTCAAGGG CGTGCAGGCG ATGTTGCAGC TGCGCGAGAC GGTCAAACCC
TATCTCGACC TGCAACTGGT GGCCTTCCCC CAGGACGGGC TCTACCGCGA TCCGACCGCG
CGGGAAAACA CCCTGCGCGC GCTGGATATG GGGCTGGACG TGGTGGGCGG CATCCCGCAT
TTCGAGCGCA CCATGGCCGA TGGTGCCGCC TCCGTGCGCG ATCTGTGCGA AATCGCCGCC
GACCGGGGCC TGCCCGTCGA TATGCACTGC GACGAGAGCG ACGATCCGAT GTCGCGGCAT
ATCGAAACCC TGGCGGCGGA AACCGTCCGC TGCGGGCTGC AGGGCAGGGT GGCCGGATCG
CACCTGACCT CCATGCATTC GATGGACAAT TACTACGTCT CGAAACTGCT GGCGCTCGTG
GCCGAGGCCG GGATTTCGGC GATCCCCAAC CCGCTGATCA ACATCATGCT GCAGGGCCGC
CACGATACCT ATCCCAAGCG CCGGGGCCTG ACCCGCGTGC GCGAGATGCA GGCGCTCGGC
ATCCCCGTGG GCTGGGGCCA GGACTGCGTG CGCGACCCGT GGTATTCGCT GGGCACCGCC
GACATGCTCG ACGTGGCCTT CATGGGGCTG CATGTGGCGC AGATGTCCGC GCCGGAAGAG
ATGGCGCGCT GTTTCGAGAT GGTGACCGAA ACCAACGCCG CGATCATCGG GCTGCCGGAT
TACGGGCTGC GCAAGGGGGC GCTGGCCTCG CTCGTGGTGC TCGATGCCGC CGACCCGATC
GAGGCGGTGC GCCTGCGCCC GGACCGTTTG TGCGTGATCT CCAAGGGCAG GGTGGTCTCG
CGCAAGGCGC GCAACGATGC GGCCCTGACG CTGCCTGGCC GCCCCGCCAC GGTCCACCGA
AGGCATTGA
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| Protein sequence | MVDILVKGGT LPDGTQADIA ITGDRIVDVA PGIAAKAGEV IDATGDLVSP PFVDPHFHMD
ATLSYGIPRI NASGTLLEGI ALWGELKHET TIDAMIDRAL RYCDWAVSMG LLAIRSHVDT
CDDSLKGVQA MLQLRETVKP YLDLQLVAFP QDGLYRDPTA RENTLRALDM GLDVVGGIPH
FERTMADGAA SVRDLCEIAA DRGLPVDMHC DESDDPMSRH IETLAAETVR CGLQGRVAGS
HLTSMHSMDN YYVSKLLALV AEAGISAIPN PLINIMLQGR HDTYPKRRGL TRVREMQALG
IPVGWGQDCV RDPWYSLGTA DMLDVAFMGL HVAQMSAPEE MARCFEMVTE TNAAIIGLPD
YGLRKGALAS LVVLDAADPI EAVRLRPDRL CVISKGRVVS RKARNDAALT LPGRPATVHR
RH
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