| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1942 |
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| Symbol | |
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| ID | 5712936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2031291 |
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| End bp | 2032652 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641267867 |
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| Product | putative GSCFA family protein |
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| Protein accession | YP_001533284 |
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| Protein GI | 159044490 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.562926 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0000963078 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACATCCA ACCCGATCGA GACCGGCCCC GCACCAGAGG TGCTGCGCCG GGCGTCCCGC
AACCCGCTGC GCCGCTACCC CACGCCCGAC GCCGGGGGGG ACCGGCTCTA CCCGCTGGCC
ATGCCCGCGC CGACCCCGTC CTTCGAATTC AGTTCAAAAG AAACCGTCTT CGCCCTCGGC
TCCTGCTTTG CCCGCAACAT CGAGGACGCG CTGGCCGCCG AAGGCTTCCG CGTGCTCAGC
CGCGAGTTCG ACCTGGGCGA GATCGGCGCG AGCCTCGATG ATGCCGCCAA TTTCTTCAAC
AAGTATACCA TCCACTCCAT GCTGAACGAG CTGCGCTGGG CCTTCGACCG CGACAGCTTC
CCCGGCGCGG ACATGCTCTA CCCCCTGCGC GACGACGACA CCGCCTACCG CGACCTGCAA
CTGGGCTCGG CCAAGCTCGC CTTCCCGCGC GACCGCATCC TCGCCTTCCG CCACCGGTTT
CTGGATGCCG TGGCCCAGAT CGCCGAGGCC GACGTGGTGG TGATGACCCT GGGCTATGTC
GAAGGCTGGC GCGACACCCG GCTCGACCTG GCGCTCAACA CCGCGCCCCC TCCGGCACTC
TGCGCCCGCG AGCCCGACCG CTTCGCCTTC GAGGTGCTGA GCTACGAGGA TGTGCTGGGC
GGACTGCGCG CCTTCCACGC GCTGCTGACC GCCCACCGCA CCAAGCCGCT CAAGATGCTG
CTGACCGTCT CGCCCGTCCC GCTCCTGAGC ACCTTCCGCG ACATGGACGT GCTGGTCGCC
AACTCCTACT CCAAGGCCGT GCAACGCGCC GCGGTCGAAA CCTTCGTCGC CGAAACCCCC
GGCGTCGACT ACTTCCCGTC CTACGAATGC GTCACCCTGA GCGACCCGGC CGCGATCTGG
ACCGAGGGCG ACTTCCGCCA CGTCGCCCCC GATCTGGTCA CCCGCATCAT GTCCAGCGTC
CTGACCGCCT ATGTCCCCGG CTGGGGCGAT AAGGGCGCGC TTACCCGCGC GGCGACCCGC
GCCACCACGC GGCTTCTGCT CGGCGCCGGA CGCCATGACG AGCTTCTGGC GCTGCTCGAC
GCCCACGGCC CCACGGACGA TGCCGAGCTG ACCGCCGCCC ACGCCCTCGC CCTGCGCCGC
ACCGACCGCA CCGCGCAAGC CGTGGCCCTG ATGTGCGAGG TGGTCGAACG CACCCCCGAC
GACCCCCAGC CCCTCGAACG GGTGATCCGC TGGTGCGAAC AACTCGACCG CATGGCCGTG
GCCCGCGACT ACCTCGACCT GCACGCCCAA CGCTTCCCCA AGCGCCGCAA GTTCCGCCGG
GGCCGCAAGT GCCGCAAGGC CGCCAACCGG GGCCGCGGCT GA
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| Protein sequence | MTSNPIETGP APEVLRRASR NPLRRYPTPD AGGDRLYPLA MPAPTPSFEF SSKETVFALG
SCFARNIEDA LAAEGFRVLS REFDLGEIGA SLDDAANFFN KYTIHSMLNE LRWAFDRDSF
PGADMLYPLR DDDTAYRDLQ LGSAKLAFPR DRILAFRHRF LDAVAQIAEA DVVVMTLGYV
EGWRDTRLDL ALNTAPPPAL CAREPDRFAF EVLSYEDVLG GLRAFHALLT AHRTKPLKML
LTVSPVPLLS TFRDMDVLVA NSYSKAVQRA AVETFVAETP GVDYFPSYEC VTLSDPAAIW
TEGDFRHVAP DLVTRIMSSV LTAYVPGWGD KGALTRAATR ATTRLLLGAG RHDELLALLD
AHGPTDDAEL TAAHALALRR TDRTAQAVAL MCEVVERTPD DPQPLERVIR WCEQLDRMAV
ARDYLDLHAQ RFPKRRKFRR GRKCRKAANR GRG
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