| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1940 |
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| Symbol | |
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| ID | 5712934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2029271 |
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| End bp | 2030071 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641267865 |
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| Product | ABC transporter ATP binding protein |
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| Protein accession | YP_001533282 |
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| Protein GI | 159044488 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0000682948 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCACCA GCATCGAGAT CGCCGGCATC ACCCATGCCT ATGACACCGC GTCGGGCAAG
CTGCCGGTGC TCCACAATCT CGACTTCACC GTGCCCTCGG CGGCCTTCTG CGCCGTGGTC
GGCCCCTCGG GCTGCGGCAA GTCCACGCTC ACGCGCCTCG TCGCGGGCCT GCTGATCCCC
GACGAAGGCG AGGTGCGGCT CGACGGCCAG CCCGTGAAGG GCCCGCGCGC CTCGGTCGGC
ATGGCTTTCC AGAACCCGGT CCTGCTGGAA TGGCGCACCA TTCTCGACAA CGTGATCCTG
CCGCTGGAAA TCGTGCCCAA TTCCCTCTCT CGCGCCCAGA AAGAAGACCG CGCCCGCGAA
CTGCTGGCGC TGGTCGGCCT CGAAGGCTTC GAGGCCAAGC GCCCATCCGA GCTGTCGGGG
GGCATGCGCC AGCGCGCCTC GCTCTGCCGC GCCATCGCCC ACAAGCCCGA CATCCTCATC
ATGGATGAAC CCTTCGGCGC GCTCGACGCC TTTACCCGCG AGGATCTGTG GCAGACCATG
CACCGCCTCC GCGCCGAAGA GCCGTTCACC TGCATGCTCA TCACCCACGA CCTGCGCGAA
TCGATCTACC TCGCGGATCA GACCATCGTG CTCTCGGACC GCCCCGCGCG GGTGCAATAC
ACGCTCGACA CCTCCTTCGG CGGGCGCACC GATCTCGACA TGCTGTTCGA GCCCGAGGCG
GTCGAAATGC TCCATGACCT GCGCAACCAG ATCAAGGTCG CCCAGGGCCG CCAGGACGCA
CCCGTCCAGG CCGCCGAATA G
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| Protein sequence | MTTSIEIAGI THAYDTASGK LPVLHNLDFT VPSAAFCAVV GPSGCGKSTL TRLVAGLLIP
DEGEVRLDGQ PVKGPRASVG MAFQNPVLLE WRTILDNVIL PLEIVPNSLS RAQKEDRARE
LLALVGLEGF EAKRPSELSG GMRQRASLCR AIAHKPDILI MDEPFGALDA FTREDLWQTM
HRLRAEEPFT CMLITHDLRE SIYLADQTIV LSDRPARVQY TLDTSFGGRT DLDMLFEPEA
VEMLHDLRNQ IKVAQGRQDA PVQAAE
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