| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1930 |
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| Symbol | |
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| ID | 5712924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2017199 |
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| End bp | 2018038 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641267855 |
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| Product | putative integral membrane protein DUF6 |
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| Protein accession | YP_001533272 |
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| Protein GI | 159044478 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.211906 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0000000927699 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCCTCG ATGTCTTTCT TGCCGTTCTG GTCGCCGCCT TCCTGCACGC GGCGTGGAAT
GCGGTGATCA AGACCGGCGG CGACAAGATC GCCGTGATGC TGATCATGAC GCTGGTGCAA
GGCGGCTTGG GGCTGGCGAT TGCCCTGACG CGTCCCCTGC CAGGCCCGGA GGTCTGGGGC
TGGCTGCTGG CCTCGGGGGT GTTTCACAGC CTCTACAAGC TGGCGCTGGC CTCTGCCTAT
GAGCGGGGGG ATCTGAGCCG GGTTTATCCA ATCGCACGCG GCGCGGCGCC GGTGCTGGTG
CTGGGGATCG GGGCTGTCGC GCTGAGCGAT GTGATCACCG GCCTCGAGGC GGCGGCGGTC
GTGGTGCTGG GATGCGGGAT CCTGCTGATG GCGCGGGGCA TCTTCAGCCT TGGCGAGAAC
CGCGCGCTCT TGCCTTTCGC GCTGGGATCG GCCCTGGCCA CGGCGGGGTA TTCCCTTGTG
GACGGGATGG GCGCGCGGGT CTCCGGGGAT GCGGTGGGGT ATGTCGCGTG GCTTTTCGTG
CTGGACGCGG TGTTTTTCGC CCCCGTGGTG CTGGCGTTGC GGGGCCGGTC GCTGCTGGCG
GGGCCGGGGC GGCAGGACTG GCTGAAGGGC GGGGTGGCGG CGCTGGCCTC TTACGGGGCC
TATGCGATCG CGGTCTGGGG AATGACCCGG GCGCCCATCG CATTGGTCGC GGCGCTGCGC
GAGACCTCGA TCCTGTTCGC GGTGCTGATC GGTTGGCTGG TCTTCGGCGA GCGGATGGAC
CGGATGAAGC TGCTGGCGGC CGGGCTGATC GTGACCGGCG TGGTGCTGAT GCGGGTCTGA
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| Protein sequence | MPLDVFLAVL VAAFLHAAWN AVIKTGGDKI AVMLIMTLVQ GGLGLAIALT RPLPGPEVWG
WLLASGVFHS LYKLALASAY ERGDLSRVYP IARGAAPVLV LGIGAVALSD VITGLEAAAV
VVLGCGILLM ARGIFSLGEN RALLPFALGS ALATAGYSLV DGMGARVSGD AVGYVAWLFV
LDAVFFAPVV LALRGRSLLA GPGRQDWLKG GVAALASYGA YAIAVWGMTR APIALVAALR
ETSILFAVLI GWLVFGERMD RMKLLAAGLI VTGVVLMRV
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