Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1918 |
Symbol | |
ID | 5712911 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 2001559 |
End bp | 2002620 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641267843 |
Product | putative modification methylase |
Protein accession | YP_001533261 |
Protein GI | 159044467 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00266275 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00000000000360377 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGGATCCAT TCATGGGATC GGGCACGACT GCAATTGAAG CTGTCCGCTA TGCGAATTCT GTGCACGGTG TGGAAGTGGA CCCGTACGCC AGATTAATTG CTTCAGTCGC AACGCAGAAG TATTCTGAAG ATGAGATTGG AAAAATTTCA TTCCTGGTTT CCGAGATCGG GAGAGCGTTT GAACATCAAT CCCTGTATGA CGATTTGAAG CCTAGACTTG CAAACATCGA ATACTGGTTT GGAGATGAAA ACTTTTCCGA TCTGTTGAAG TTGAAGTCTG CCATTTTTGA GCTTACGGAT GAGGGGAAAG TACGCGAATT CCTTCTGGCT GCCTTTGGCG ATATCATCAG AGCCTGTTCA AAAGCTGAAA GGCAGTCTTT AAAGCCATAT ATTTCGAAAA AGTATGAAAA GAAGCCTAAA CGGGTTTTGG ATGAGTTCCT CAGAATAGCT TCTAAGTATA TTGATGCTGT ATCGGAAAGC CAAAAGCATA AATCTGATGG AATCGTTTGG GAGGGTTTTG ATGCAACTAA TTTTGACGTT TCAACGTCGG TCGATCTAGC TATAACCTCA CCTCCCTACA TCAATGCCAT GGATTATACG CGATGTATCA AACTCGAGAG CGCATGGATC GGAACCGCGG ATGACGATGC GATAAAGACA GTTCGCAATG CCCAGCTAGG TGAAAGGGTG CGCCGCAATC GAGAGGTACG GGAAGATTTC GTTTATTCGA TCTCGCGGCA ACACCTTGGA GAACTTGAAA CGATTGATGA AGCTAGGTTC AAGACTGCGG TAGTTTTCTT CGATGATATG AGGAGAAATA TGGAAGCCGT TTTCCGCGCG CTTAGGCCCG GAGGTTTCTA CTATATCATC ATCGGAAACA GTAGGATTCG AGGTGTAGAC GTTCCAACTC ATCAAGTAAT CGCAGAGATT GCCGGTCAAC TTGGTTACAA GTGGGACAAG TATTTCCTCT ATCGCATCAG AGACCACCGC ACTTCGATCC CCAGAGGGGA TCGAGGGGGG AAAATCGAGT TTGAACATGC GCTTGGACTC ATGAAGCCTT AA
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Protein sequence | MDPFMGSGTT AIEAVRYANS VHGVEVDPYA RLIASVATQK YSEDEIGKIS FLVSEIGRAF EHQSLYDDLK PRLANIEYWF GDENFSDLLK LKSAIFELTD EGKVREFLLA AFGDIIRACS KAERQSLKPY ISKKYEKKPK RVLDEFLRIA SKYIDAVSES QKHKSDGIVW EGFDATNFDV STSVDLAITS PPYINAMDYT RCIKLESAWI GTADDDAIKT VRNAQLGERV RRNREVREDF VYSISRQHLG ELETIDEARF KTAVVFFDDM RRNMEAVFRA LRPGGFYYII IGNSRIRGVD VPTHQVIAEI AGQLGYKWDK YFLYRIRDHR TSIPRGDRGG KIEFEHALGL MKP
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