| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1902 |
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| Symbol | |
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| ID | 5712895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1984955 |
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| End bp | 1986331 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641267827 |
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| Product | putative poly(beta-D-mannuronate) O-acetylase |
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| Protein accession | YP_001533245 |
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| Protein GI | 159044451 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1696] Predicted membrane protein involved in D-alanine export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0722187 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0000260592 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTTTTCT CGACCCCCAT TTTCCTTTTC GGGTTTCTGC CCGTGTTTCT CGCCGCCTAT
TACCTGGTGC CGCGCGCGGG GCGAAACTGG CTGATCCTGC TGGCCTCGAC GCTGTTCTAT
GCCTGGTGGC GGACAGACGC GCTCATCGTG CTCTACGTCG TGGCGGGCAG CAGCTATGCT
GCCGCAAAGC TCGCCACGCA GACGCGCGAT GCAACGGTCA AGACATGGGC CGTGCGCGCC
GGTGTGGCGG TGAACCTCGC GATCCTGGGG TGGTTCAAAT ACACCACCTT TATCCTGGGG
AACCTGAACA CCGCCCTTGG CGGCGACGCC CTGACGGTGC CCGAGATCAT CCTGCCCATC
GGGCTGTCCT TCCTGACCTT CCAATCCATC AGCTACATCC TTGATGTTGC GCGCGGTGAC
GCGCCGCCTG CGCGAAAGCT GTCGGATTTC CTGGCCTTTT CATCGTTGTT TCCGCAACTG
ATCGCGGGGC CGGTGCTGCG CTACAAGGAC CTTGCGCACC AGTTCGAAAC GCGGGAGCAC
TCGGTCGCCC TGTTTTGCCG AGGCGCGCGC CGGTTCATCG AGGGCCTGGC GATGAAGCTG
CTGATCGCGG ACAGCGTGGC GCCCCTTGCC GATCGCATCT TCGCCCTGTC TGATCCCACC
GTCGCCGAGG CGTGGCTCGG CGCGCTTGCC TACAGCATTC AGCTGCTGTT CGATTTCGCA
GGCTACTCGG CCATGGCCAT CGGGCTGGGT CTGATGATCG GGTTCCATTT CCCCGAGAAC
TTCGATGCGC CGTACACCTC GCGCTCGATC ACCGAGTTCT GGCGCCGCTG GCATATCAGC
CTGTCGCGCT GGCTGCGCGA TTACCTCTAT GTGCCGCTCG GCGGAAACCG GGGCGGACGG
CTCAGGACCT ACCGCAACCT GGTGCTGACC ATGGTGCTGG GCGGGATCTG GCATGGCGCC
AACTGGACCT TCGTGGTCTG GGGGCTCTGG CATGGCGGGC TGATGGCGCT GGAGCGCGCG
CTCGGCGCGA AACACCGCGA CACCGTCTGG CCCCGGTTGC TCGCCTGGCC GGTGACGATG
ATCTGCGTGG TCCTCGGCTG GGTCGTGTTC CGTGCTGCGA GCCTCGGCGA GGCAATGACC
ATGTATGCGG GCATGTTCGG CGCCCATGGA TTGCCCCTTC GGGCGGAAAC TGTCCTGCTG
ACGGCGCCGA CCGAGGTGAT CTGCCTCGCC CTGGGAATGG TCTTGTCCAT GGCCCCGCGC
CCGGCCCTGC ACCCCGTGGC CTGGGCTGCG CGCCTGCAAC CAGCCGCACT TTCCATGCTC
TGCCTTATCG CGGTGCAGGC TCGTACGGTC AGCCCTTTCC TGTATTTCCA GTTCTGA
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| Protein sequence | MVFSTPIFLF GFLPVFLAAY YLVPRAGRNW LILLASTLFY AWWRTDALIV LYVVAGSSYA
AAKLATQTRD ATVKTWAVRA GVAVNLAILG WFKYTTFILG NLNTALGGDA LTVPEIILPI
GLSFLTFQSI SYILDVARGD APPARKLSDF LAFSSLFPQL IAGPVLRYKD LAHQFETREH
SVALFCRGAR RFIEGLAMKL LIADSVAPLA DRIFALSDPT VAEAWLGALA YSIQLLFDFA
GYSAMAIGLG LMIGFHFPEN FDAPYTSRSI TEFWRRWHIS LSRWLRDYLY VPLGGNRGGR
LRTYRNLVLT MVLGGIWHGA NWTFVVWGLW HGGLMALERA LGAKHRDTVW PRLLAWPVTM
ICVVLGWVVF RAASLGEAMT MYAGMFGAHG LPLRAETVLL TAPTEVICLA LGMVLSMAPR
PALHPVAWAA RLQPAALSML CLIAVQARTV SPFLYFQF
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