| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1883 |
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| Symbol | |
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| ID | 5712875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1960643 |
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| End bp | 1961485 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641267807 |
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| Product | putative clpA/clpB family protein |
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| Protein accession | YP_001533226 |
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| Protein GI | 159044432 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0714] MoxR-like ATPases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0406023 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.307774 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGTTCG AAGGTACACA GGCATATGTC GCCACCGACG ATCTCAAGGT GGCGGTCAAC
GCGGCCGTGA CCCTGGAACG TCCGCTGCTG GTCAAGGGCG AGCCGGGCAC CGGCAAGACC
GAACTGGCCC GCCAGGTCGC CGCCGCGCTC GATCTGCCGA TGATCGAATG GTCGATCAAA
TCCACCACCC GGGCCCAGCA GGGGCTCTAT GAATACGACG CGGTCAGCCG GTTGCGCGAC
AGCCAACTGG GCGAGGACCG GGTCCATGAC GTGTCCAACT ACATCAAGAA GGGCAAGCTC
TGGCAGGCGT TCGAGGCCGA CGGCAAGGTC GTCCTGCTGA TCGACGAGAT CGACAAGGCC
GATATCGAGT TTCCCAACGA CCTGCTGCAG GAACTCGACC GGATGGAATT CTTCGTCTAC
GAGACCGGCG AGACCATCCG CGCCAAGGTC CGGCCCATCG TCATCATCAC CTCGAACAAT
GAAAAGGAGC TGCCCGACGC CTTCCTGCGG CGCTGCTTTT TCCACTACAT CGCCTTTCCG
GGCGAAGAGA CCCTGCGCAA GATCGTCGAG GTCCATCATC CGGGCATCAA GGGCGCGCTG
TTGTCCACGG CGCTGACCCA GTTCTACGAG ATCCGCGAGA CCCCGGGGCT GAAGAAGAAG
CCCTCGACCT CCGAGGTGCT GGACTGGCTC AAGCTGCTGC TGGCCGAGGA CCTGTCGCCC
GAGGATCTCA AGCGCGACGG GGCCAATGCG CTGCCCAAGC TCCACGGCGC GCTCCTGAAA
AACGAGCAGG ACGTGGCCCT GTTCGAACGG CTGGCCTTCA TGGCGCGCTC CGGGCGCCGC
TGA
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| Protein sequence | MRFEGTQAYV ATDDLKVAVN AAVTLERPLL VKGEPGTGKT ELARQVAAAL DLPMIEWSIK
STTRAQQGLY EYDAVSRLRD SQLGEDRVHD VSNYIKKGKL WQAFEADGKV VLLIDEIDKA
DIEFPNDLLQ ELDRMEFFVY ETGETIRAKV RPIVIITSNN EKELPDAFLR RCFFHYIAFP
GEETLRKIVE VHHPGIKGAL LSTALTQFYE IRETPGLKKK PSTSEVLDWL KLLLAEDLSP
EDLKRDGANA LPKLHGALLK NEQDVALFER LAFMARSGRR
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