Gene Dshi_1882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1882 
Symbol 
ID5712874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1959965 
End bp1960423 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content67% 
IMG OID641267806 
Productputative acetyltransferase 
Protein accessionYP_001533225 
Protein GI159044431 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0785639 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.209526 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGTC CTGACCTCTG CATCCGGGCG ATCACGCCCG ACGACGCCCC CGCGTGGCGG 
GCACTTTGGC GCGCCTATCT CGCGTTTTAC GAAACCGAAC TGCCCCCGGA GGTCTACGCC
ACCAGCTTTG ATCGGCTCTG CGACCCGGAG GTGACCGACT ACCAGGGCGC GTTGGCGGTG
CGGGGCGACA CGCCCGTGGG GCTCGTTCAC TATATCTACC ACCGCCATGG CTGGCAGGTG
GCCCCGGTCT GCTACCTTCA GGATCTGTTC ACTGCCCCCG CCGCACGTGG ATTGGGGGTG
GGGCGGGCAC TGATCGCCCA TGTCTACGCC GCCGCCGATG CCGACGGTGC CGCGGGGGTC
TATTGGTTGA CCCAGGCGCA CAACACCCAG GCCCGGCGGC TCTATGACCG GGTCGCCCGG
GAAACCCCGT TCATCAAGTA TGTGAGGGCG GCGTCATGA
 
Protein sequence
MTGPDLCIRA ITPDDAPAWR ALWRAYLAFY ETELPPEVYA TSFDRLCDPE VTDYQGALAV 
RGDTPVGLVH YIYHRHGWQV APVCYLQDLF TAPAARGLGV GRALIAHVYA AADADGAAGV
YWLTQAHNTQ ARRLYDRVAR ETPFIKYVRA AS