Gene Dshi_1880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1880 
Symbol 
ID5712872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1958425 
End bp1958592 
Gene Length168 bp 
Protein Length55 aa 
Translation table11 
GC content67% 
IMG OID641267804 
Producthypothetical protein 
Protein accessionYP_001533223 
Protein GI159044429 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.267818 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.265566 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGTGG TGGCTGGAGT GTTGGGTGGG GCTGCCTGGG GGGGCTGGCT CGCCAAATCC 
CGCGGCGGGC TGAAGAAGGA CATGGCGCAA TACGCCGCCG GGTTCGCCAT CCTGTGGGGG
ATCATCGGGC TGATCGCCAC CATCGTGATC GAACGCATGG CGGCCTGA
 
Protein sequence
MLVVAGVLGG AAWGGWLAKS RGGLKKDMAQ YAAGFAILWG IIGLIATIVI ERMAA