| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1877 |
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| Symbol | |
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| ID | 5712869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1954772 |
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| End bp | 1956046 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641267801 |
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| Product | hypothetical protein |
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| Protein accession | YP_001533220 |
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| Protein GI | 159044426 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4325] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.706063 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.740241 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCC TGACCTGGCT CAAACTCGTT CTTCTGCGCT ACTATCGCAA CATGGGCCTG
CGCGTGCTGC TCTATGCCTT GCTGTCGCTG GTCGCCACCT TGATCAGCCC TTTGGTCAGC
CCGCTGCTCA ATGGCCGCGT GAACATGCAG ATCGACTTCG CGTCGGTCAC CCCGGTCCTG
ACGATCCTCG CCTCGTCGAT GCTGGCCGTG TCGACCTTTT CGCTCAACAT CATGGTCTCC
GCCCATCGCG GGGCCGCCGA TGTGGCGACA CCCCGGATGC ACCGGATCCT GCTGGAGGAC
ACGACCACCC AATCGGTGCT TGCGGCCTTC ATCGGGGCCT TCGTCTATTC CCTCGGGTCG
ATCGTGCTCT ATCGCCTGGG CTTCTACCCC GAGGATGCCG CCCTGGTGGT CATGGCGATC
ACGACGGTCG TGGTGATCCT CGTCGTGATC TCGCTGCTGC GCTGGATCGA GCATCTGACC
ACCATGGGCA GCCTGCGCGA CAGCCTCGCC TCCGCCGAGA CCCGCGCCCG CGAGGCCCTG
AAAGCCCAGG CCGAAAACCC GCGCTTCGGT GCCTCGCCCC TGTCGCCGGA CACGGTTCTG
CCACTCTCCA CCACGCCGCT GCGCGCGCCG GTCTCTGGCT ATCTGCAACT GATCGACATG
GCCGCCATCG AGGACTGCCT GCCCGACCAG GCGGTGCTCT ACCTAGATGT GGCGCCGGGC
GCGCATCTCC TGGAGGGCGA GGTGATCGGC CAGGTCTCCG GCCAGGTCGA CGATGACACC
CTCTCGGGGC TTGGGCGCGC CTTGACCTTT GGCGACTGCC GCACCCATGA ACAGGACGCG
GCCTTTGGGC TGACCGTCCT GTCCGAGATC GCCGAGAAAG CCCTGTCGCC CGGCATCAAC
GATGGCGGCA CCGCGACCGA GGCGCTGCTG ATCCTCAAGG CGCTCCTGTG GGAGTTCGGG
CGCACCGACC CGGACCCCGA CGCGCCAAAG GCACCTCGGG TGTTCGCCGC CTTCCCCGGA
CCCGCCCGCT TCATCGAGGC AGCCTTCGCG CCCACCGCGC GCGACGGGGC CGGGTCGATC
GAGACGGCCC TGACCCTGCG CCAATGCCTC GCGTCCCTGT CGCGGTCCGA CATTACCGAG
ATGTCGGCGG CGGCCCAGGC GCTCGCCGCC AATGCGCTGT GCTATGCCGA AGAGGCCGGG
ATGCCGCCGC GCGACCTCGA CCGGCTCCGC GCCATTGCGG TCGGCGCGCC CTCTGCGCAG
GCCGCCGCGG TCTGA
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| Protein sequence | MTRLTWLKLV LLRYYRNMGL RVLLYALLSL VATLISPLVS PLLNGRVNMQ IDFASVTPVL
TILASSMLAV STFSLNIMVS AHRGAADVAT PRMHRILLED TTTQSVLAAF IGAFVYSLGS
IVLYRLGFYP EDAALVVMAI TTVVVILVVI SLLRWIEHLT TMGSLRDSLA SAETRAREAL
KAQAENPRFG ASPLSPDTVL PLSTTPLRAP VSGYLQLIDM AAIEDCLPDQ AVLYLDVAPG
AHLLEGEVIG QVSGQVDDDT LSGLGRALTF GDCRTHEQDA AFGLTVLSEI AEKALSPGIN
DGGTATEALL ILKALLWEFG RTDPDPDAPK APRVFAAFPG PARFIEAAFA PTARDGAGSI
ETALTLRQCL ASLSRSDITE MSAAAQALAA NALCYAEEAG MPPRDLDRLR AIAVGAPSAQ
AAAV
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