Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1874 |
Symbol | |
ID | 5712866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 1953173 |
End bp | 1953769 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641267798 |
Product | putative regulatory protein |
Protein accession | YP_001533217 |
Protein GI | 159044423 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.885441 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.710734 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTCCC CACATCCGCC GGGCCGCCCC CGGGAATTCG ACCCCGACGA GATGCTCGAC CGGATCCTGG GCCTGTTCTG GGAAAACGGC TACGAGGGCA CCGGGCTGAG CGACATCACC CGCGCCACCG GGCTGGGCAA GGCGAGCCTC TATGCCGCCT TCGGCAACAA GCACCAGATC TATCTCCGGG CGCTCGCCCG CTACGAGCAG ACGGTGGTGT CTCCGGGCGC CGCCGCCCTG CGCGCCCCCG ACACCCCGCC CCGGGATCGG ATCGCGAGGT TCCTGTCCGC TCCGGTGGAG GCGGTCGTGC AGGCGGGCGA TCACCGAGGC TGTTTTTTGT GCAACGCGGT CTCCGACCGG GCGGCGCTCG ATCCCGAAAC CGACCGGATG GTGCAGCGCG GCTACGGCAT CCTGCGGCGC GCGCTGGCCG CGACCCTGCG CGAGGCCGAC CCGGACACGC CGGACCCGGC GCTCGCCGCC CGCGCCGAGA TGCTGCTGTC GCTCTATGCC GGGCTGCGCG TGCGGGCGCG GGCCGGGGAC GGGGCGGCGG TTCTCGCCGC CAGCCGCGAC GCGGCACTGG CCCTCCTGTG TCCGTGA
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Protein sequence | MASPHPPGRP REFDPDEMLD RILGLFWENG YEGTGLSDIT RATGLGKASL YAAFGNKHQI YLRALARYEQ TVVSPGAAAL RAPDTPPRDR IARFLSAPVE AVVQAGDHRG CFLCNAVSDR AALDPETDRM VQRGYGILRR ALAATLREAD PDTPDPALAA RAEMLLSLYA GLRVRARAGD GAAVLAASRD AALALLCP
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