| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1872 |
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| Symbol | |
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| ID | 5712864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1951375 |
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| End bp | 1952643 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641267796 |
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| Product | putative soluble aldose sugar dehydrogenase |
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| Protein accession | YP_001533215 |
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| Protein GI | 159044421 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.413591 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.509919 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACGAC TGTCTGCCCT GTCGCTCGGC GCGGCACTGG CCTCTGCAAC CGCGCTTGCA
GCTCCGGCCT TCGCGGCCAA CACCACGTCC CTGAGCCACG AGATTGTGCT CGAAGGGCTC
GAGAATCCGT GGGACGTCGC CTTTCTCGAA GACGGCACGA TGTTCTTCAC CGAGAAATGC
CTCGGCCTGT CCGTGCGCCT GCCCGATGGC TCGGTCAACA AGCTCTTGGG CATGAAGGGC
ACCGACGACG ACTATGCCTC CACCGCCGAG GACCTGTTTT GCGAAGGCCA GGCCGGGATG
CAGGGCGTCG CGGTTGACCC GGACTTCGCC GAGAATCGGC AGATCTATGT CTATTCGACC
TCCGACCTGA CCGCGCCCGG CTCCAACCGC CTGTTGCGGA TGACCGTGGG CGAGGATCTC
GCCAGCGTGG CGGACCGCAC CGACATCGTC GAGGACGTGC CCTACAAGCC CGCCGCGACC
GACCACCCCT TCGGTGGCCC CGGCGCCCAT AACGGCGGCC GCGTGCGCTT CGGCCCGGAC
GGGTTCATCT ACCTGACCAC CGGCGACACC CATAACGGCG AAGGCCCGCA AAGCCCGACC
CTGCTGGCGG GCAAGGTGCT GCGCATCGAC CGCGACGGCA ATGCCGCCGA GGGCAACGCG
CCCCCCGAAG GCTTCGATCC GCGGATCTAC ACCTACGGGC ACCGCAACAC CCAGGGCATC
ACCTTCCACC CGGAAACCGG TGCTGCCATC ACCGCCGAGC ACGGCCCCTG GCACTCCGAC
GAGATCACCG TTCTGCAGAA CGGCGGCAAT GCCGGCTGGG ATCCGCGCCC GAACGTGGGC
GGCCGAGGCG AATGCCCGGA TGGCTACTGC GGCTACTCCC CGAACCAGAT GGAGGGCATG
GACCGCTACG AGCGCGCGGC CTTCATGCCG ATGACCGATC TGGCAACCTA TCCGGACGCG
ATGCAGCCGA TCTGGGACAA TAACGGCTGG TCCCAGGGCA CGTCCTCTGC CGAGTTCCTG
ACCGGGGACC AGTGGGGCGA CTGGGAAAAC CACCTGGTCG TCGGCATCAT GGGCATTGGC
TTCGGCGGCA CGCCCATCGG CCAGCGCATC GACGTGATCG AGCTCAACGA GGCGGGCACC
GAGGTGGTCG ACGTCACCGA GATGACCCTG CCGATGGAGC CCGGTCGCTT CCGCTCCCTC
GTCCAGGGCC CCGATGGCGC GCTCTACGCG GTGGTGGATC AGGGGATGAT TCACAAGATG
ATGCCGTAA
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| Protein sequence | MTRLSALSLG AALASATALA APAFAANTTS LSHEIVLEGL ENPWDVAFLE DGTMFFTEKC
LGLSVRLPDG SVNKLLGMKG TDDDYASTAE DLFCEGQAGM QGVAVDPDFA ENRQIYVYST
SDLTAPGSNR LLRMTVGEDL ASVADRTDIV EDVPYKPAAT DHPFGGPGAH NGGRVRFGPD
GFIYLTTGDT HNGEGPQSPT LLAGKVLRID RDGNAAEGNA PPEGFDPRIY TYGHRNTQGI
TFHPETGAAI TAEHGPWHSD EITVLQNGGN AGWDPRPNVG GRGECPDGYC GYSPNQMEGM
DRYERAAFMP MTDLATYPDA MQPIWDNNGW SQGTSSAEFL TGDQWGDWEN HLVVGIMGIG
FGGTPIGQRI DVIELNEAGT EVVDVTEMTL PMEPGRFRSL VQGPDGALYA VVDQGMIHKM
MP
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