| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1868 |
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| Symbol | |
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| ID | 5712860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1947542 |
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| End bp | 1948876 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641267792 |
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| Product | putative glutamate synthase large subunit-like protein |
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| Protein accession | YP_001533211 |
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| Protein GI | 159044417 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0069] Glutamate synthase domain 2 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.553438 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.798632 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGATG ACATCCCCCG CACGGCGCCG ATCAAATCGG CCACCTTCAC CGACCCGGTG
AATGCCGAGA TCCGCCGCGC CGCCGCCACG GGCATCTACG ACATTCGCGG CGGCGGGGCG
AAACGGCGCG TGCCGAATTT CGACGACCTG CTGGTGCTCG GGGCCTCCAT GTCGCGCTAC
CCGCTCGAAG GCTACCGCGA ACGCTGCGAC ACCTCCGTCA CGCTGGGCAC CCGGTATGCG
CAAAACCCGA TCCAGCTGGA CATCCCCATC ACCATCGCGG GCATGTCCTT CGGCGCGCTC
TCGGGCCCCG CAAAAGAGGC CTTGGGCCGG GGCGCGACCC TCGCGGGCAC CTCCACCACC
ACCGGCGATG GCGGCATGAC CGAAGAGGAA CGCGGCCATT CCGAGAAGCT GGTCTATCAA
TACCTGCCAT CCCGCTACGG CATGAACCCC GACGACCTGC GCCGGGCCGA CGCCATCGAG
ATCGTCGTGG GGCAGGGGGC CAAGCCCGGC GGAGGCGGGA TGCTGCTGGG CCAGAAGATC
ACCGAGCGCG TGGCCGGGAT GCGCAATCTG CCGGCCGGCA TCGACCAACG CTCGTCCTGC
CGTCACCCGG ACTGGACCGG GCCGGACGAC CTGGAAATCA AGATCCTCGA GCTGCGCGAA
ATCACCGGCT GGCGCGTGCC GATCTATGTC AAGGTCGGTG GCGCGCGCCC CTATTTCGAC
ACCACGCTGG CGGTGAAGGC CGGGGCGGAT GTGGTCGTGC TCGACGGGAT GCAGGGCGGG
ACCGCCGCGA CCCAGGACGT GTTCATCGAA CATGTCGGCC AGCCGCTGCT TGCCTGCATC
CCCGAGGCGG TCCGCGCGTT GCAGGATCTG GGCGTGCACC GCGAGGTGCA GCTTGTCGTC
TCCGGGGGCA TCCGCACCGG TGCGGACGTG GCCAAGGCGC TGGCGCTCGG GGCCGACGCC
ACCGCCATCG GCACCGCCGC CCTGATCGCG CTCGGCGACA ATGACCCGAA ATACGAGGCC
GAGTATGCCG CCCTTGGCAC CACCGCCGGG GCCTATGACG ACTGGCACGA GGGGCGCGAC
CCGGCCGGCA TCACCACCCA GGACCCCGGG CTCGCCGCCC GGCTCGACCC GGTCGAGGGC
GGCCGACGCC TGCGCAACTA CCTCAAGGTG CTCACGCTGG AGGCGCAGAC CATCGCGCGC
GCCTGCGGCA AGAACCACGT GCTCAATCTC GAACCCGAGG ACCTGTGTGC CCTGACGCTG
GAGGCCGCCG CCATGGCCAA GATCCCGCTC GCGGGCACCG ACTGGTACCC CGGCAAGCCC
GGAACCACCT ACTGA
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| Protein sequence | MKDDIPRTAP IKSATFTDPV NAEIRRAAAT GIYDIRGGGA KRRVPNFDDL LVLGASMSRY
PLEGYRERCD TSVTLGTRYA QNPIQLDIPI TIAGMSFGAL SGPAKEALGR GATLAGTSTT
TGDGGMTEEE RGHSEKLVYQ YLPSRYGMNP DDLRRADAIE IVVGQGAKPG GGGMLLGQKI
TERVAGMRNL PAGIDQRSSC RHPDWTGPDD LEIKILELRE ITGWRVPIYV KVGGARPYFD
TTLAVKAGAD VVVLDGMQGG TAATQDVFIE HVGQPLLACI PEAVRALQDL GVHREVQLVV
SGGIRTGADV AKALALGADA TAIGTAALIA LGDNDPKYEA EYAALGTTAG AYDDWHEGRD
PAGITTQDPG LAARLDPVEG GRRLRNYLKV LTLEAQTIAR ACGKNHVLNL EPEDLCALTL
EAAAMAKIPL AGTDWYPGKP GTTY
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