| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1864 |
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| Symbol | |
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| ID | 5712856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1942814 |
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| End bp | 1943926 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641267788 |
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| Product | putative membrane-bound lytic murein transglycosylase |
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| Protein accession | YP_001533207 |
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| Protein GI | 159044413 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.498098 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACGGA TCACCAGACG AACCTTCGGC GCCGGGGCAA CGGCCCTGGC TCTAGCGGGC
TGCGGCGGGG CACGGGTGCC CGCGGCGGGG CCGGCGGACG ATCTGCGACC CGTGCCGAAT
GCGGGCTATG CGGACTGGGT GGCGCGGTAC CGGGCGCGGG CGGCGGCGGA TTTCTCGGAC
GACCTGCTGC GGCGGGCTTT TGCGGGGACG GGCTACCTGC CCGGCGTGGT GGCGCGGGAC
CGCAACCAGG TGGAGTTTCG CCGGACCCTG GAGGATTACC TGGCCATCGC CGTGTCGGAC
GAGCGGGTGG CGCGGGGGCG GGCGGCGGTT GCGCAATACC GCCCCACTTT GGCTGCGATC
GAGGACCGTT ACGGCGTGCC GCCGGAGTTG GTCACGGCGA TCTGGGGGCT GGAGAGCTTC
TATGGCGACC GCAAGGGGGA TATCCCCGTG GTCTCGGCGA CCTCGACGCT GGCCTATGAC
GGGCGGCGGG GGGCGTTCTT CGAGGGGCAG CTGACCGCGG CGCTGCGCAT CCTGCGGGCC
GGGGATATCC CGGCGGACCG GCTGGTGGGC AGCTGGGCGG GCGCGATGGG ACATACGCAG
TTCATCCCCA CATCGTTCGA GGCCTTCGCG GTGGATTTCA CCGGCGACGG GCGGCGGGAC
ATCTGGTCCG ACGATCCCAC GGACGCGCTG GCATCGGCGG CGGCGTATCT GGACCGCAAC
GGCTGGACCA GGGGGCTGCG CTGGGGCGCG GAAGATCCGG AGGGCAGCCT CCAGCCGCAA
CCGGGGGGGC CGCGTTTCGC CACCACGTCG AATTTCAACG TGATCAAGCG CTACAACAAC
TCGGACGCCT ACGCGATCGG GGTCGGGCAC CTGTCGGAAC GGATCGCGGG CGGCGGTCCC
CTGCGCACGC CGTTTCCGCC CGACGCCAAC GGGCTGACCA AGGCGGACCG GGTGACTCTG
CAAGAAGGGC TGACACGGGC GGGGTTTGAT ACGGGTGGTG CGGACGGCGT GGTGGGCCCG
AACACCGAAG CCGCGATCCG GGCGTACCAG CGCGCCCGGG GCCTGCCGGT GACGGGGGTG
CCTTCGATGG AGATGGTAAG GGCGGTGCGG TGA
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| Protein sequence | MTRITRRTFG AGATALALAG CGGARVPAAG PADDLRPVPN AGYADWVARY RARAAADFSD
DLLRRAFAGT GYLPGVVARD RNQVEFRRTL EDYLAIAVSD ERVARGRAAV AQYRPTLAAI
EDRYGVPPEL VTAIWGLESF YGDRKGDIPV VSATSTLAYD GRRGAFFEGQ LTAALRILRA
GDIPADRLVG SWAGAMGHTQ FIPTSFEAFA VDFTGDGRRD IWSDDPTDAL ASAAAYLDRN
GWTRGLRWGA EDPEGSLQPQ PGGPRFATTS NFNVIKRYNN SDAYAIGVGH LSERIAGGGP
LRTPFPPDAN GLTKADRVTL QEGLTRAGFD TGGADGVVGP NTEAAIRAYQ RARGLPVTGV
PSMEMVRAVR
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