| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1863 |
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| Symbol | serS |
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| ID | 5712855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1941457 |
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| End bp | 1942752 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641267787 |
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| Product | seryl-tRNA synthetase |
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| Protein accession | YP_001533206 |
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| Protein GI | 159044412 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0172] Seryl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.517326 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATGACA TTCGCCTGAT CCGCGAGACG CCGGAGGCGT TCGACGCCGC GCTGACCCGC
CGCCCCGGGG TGGCGCCGGT CTCGGGCGAG ATCCTCGCGC TGGATGCCGC CCGGCGGGAG
AAGATCCTGG CTGCGGAGAC CGCGCAGGCG GAGCAGAACG CGGCCTCCAA GCAGGTGGGG
GCGGCCAAGG CCGCGGGGGA TGAGGCGGAG TTCGAGCGGC TGCGCGCGTT GGTGGGCGCG
AAGAAGGCGG AGGTGGCCGC GCTCAAGGCC GCGGCGGCGG AGGATGATGC GGCGCTGAGC
GCGCGGCTGA TGGAGATCCC CAACTTGCCC TTCGACGATA CGCCCGAGGG CGCGGACGAG
GCGGACAATG TGGAGATCAA GCGCTGGGGC ACGCCGCGCG ACCTGGGATT TGCGCCGAAG
GAGCATTACG CGCTGCCCAG CGTCGTGCCG GGCATGGATT TCGAGGCGGC GGCGAAGCTG
TCGGGGTCGC GGTTCGTGGT GCTGTCGGGG GCCGTGGCGC GGGTCCACCG GGCGCTGGCG
CAGTTCATGG TCGACACCCA TGTGGAGCAG AACGGTCTGA CCGAGACCTG GACGCCGGTG
CTGGTGCGCG AGGAGATGAT GCTCGGCACC GGGCAGTTGC CGAAGTTCGG GGAGGACAGC
TACCAGACGC GGGAGGGCTG GTGGCTGGTG CCCACAGCGG AGGTGAGCCT GACCAACCTG
GTGGCGGGCG AGATCGTGGA GGCGGCCTCC CTGCCCCGGC GCTATGTGGC CCATACCCAG
TGCTTCCGGT CCGAGGCGGG CTCGGCGGGG CGGGACACGG CCGGCATGCT GCGCCAGCAC
CAGTTCGAGA AGGTGGAGAT GGTGTCGGTG ACGCGGCCCG AGGACAGCCG GGCGGAGCTG
GACCGGATGA CCGGCTGCGC CGAGGGGATT CTGGAGGCGC TGGGGTTGCC CTACCGCACC
ATCGTGCTGT GCACCGGGGA CATGGGCTTC GGGGCGCGGC GGACCCATGA TATCGAGGTC
TGGCTGCCCG GGCAGGACGC CTATCGCGAG ATCAGCTCGG TCTCGGTCTG CGGCGATTTC
CAGGCGCGGC GGATGAATGC GCGGTTCCGG CCGGAGGGCG GGGGCAAGCC GGAGTTCGTG
CATACGCTGA ACGGGTCGGG GCTGGCCGTG GGGCGGTGCC TGATCGCGGT GCTGGAGAAC
GGGCAGCAGG CGGACGGGTC GGTGGTGCTG CCGGAGGTGC TGCATGGGTA TCTGCGGGGG
CGGACGCGGA TCGACGCTCA GGGGGGGCTC GTCTGA
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| Protein sequence | MHDIRLIRET PEAFDAALTR RPGVAPVSGE ILALDAARRE KILAAETAQA EQNAASKQVG
AAKAAGDEAE FERLRALVGA KKAEVAALKA AAAEDDAALS ARLMEIPNLP FDDTPEGADE
ADNVEIKRWG TPRDLGFAPK EHYALPSVVP GMDFEAAAKL SGSRFVVLSG AVARVHRALA
QFMVDTHVEQ NGLTETWTPV LVREEMMLGT GQLPKFGEDS YQTREGWWLV PTAEVSLTNL
VAGEIVEAAS LPRRYVAHTQ CFRSEAGSAG RDTAGMLRQH QFEKVEMVSV TRPEDSRAEL
DRMTGCAEGI LEALGLPYRT IVLCTGDMGF GARRTHDIEV WLPGQDAYRE ISSVSVCGDF
QARRMNARFR PEGGGKPEFV HTLNGSGLAV GRCLIAVLEN GQQADGSVVL PEVLHGYLRG
RTRIDAQGGL V
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