Gene Dshi_1856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1856 
Symbol 
ID5712848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1935699 
End bp1936058 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content70% 
IMG OID641267780 
Producthypothetical protein DUF498 
Protein accessionYP_001533199 
Protein GI159044405 
COG category[S] Function unknown 
COG ID[COG3737] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.239949 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.840509 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTGA ACGAAGTCGT CCATACGGAT GCCATGCCGG TCGAGGGGTA CGGCCCCGGC 
TTCTTTCGTG TCGGCGGGCA GGTCCACGAG GGGGCGCTTT ACCTGTCGCC CGACGGGGTG
CAGCGCTGGG GCGGGCTGGA GGATACCGCG CCGTTCCGCC ACGATACCAT CGATGTGCTG
TTTCTCGGCA TGGGGGCGGA GATCGCCCAT GCGCCCGCGG CCTTCCGCGC CGAGATCGAG
GCGCGCGGCA TCGGGCTGGA GGTGATGTCC TCGCCCGCGG CCTGCCGGAC CTACAATGTG
CTGCTGTCGG AAGGGCGGCG CGTGGGCCTG GCCCTGTTGC CGGTGGTGCC CACCGCGTGA
 
Protein sequence
MRLNEVVHTD AMPVEGYGPG FFRVGGQVHE GALYLSPDGV QRWGGLEDTA PFRHDTIDVL 
FLGMGAEIAH APAAFRAEIE ARGIGLEVMS SPAACRTYNV LLSEGRRVGL ALLPVVPTA