| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1853 |
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| Symbol | ccmC |
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| ID | 5712845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1933597 |
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| End bp | 1934328 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641267777 |
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| Product | heme exporter protein C |
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| Protein accession | YP_001533196 |
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| Protein GI | 159044402 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR01191] heme exporter protein CcmC |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.024303 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.648082 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCATTGT GGGAATACGC CAATCCGAAG AAATTCATGC AGACCTCGTC TGCGGTGCTG
CCATTCGTGG CGGTGCTGAC GGTGGTGTGC CTGACCGTGG GGCTGACATG GGGTTTTTTC
TTCACGCCTG ACGATTTCCG GCAGGGATCG ACGGTGAAGA TAATCTACCT GCACGTCCCC
TCGGCGATGA TGGCGATCAA CATCTGGGTG ATGATGCTGG TCACCTCCCT GATCTGGCTG
ATCCGGCGGC ACCATGTTTC GGTTCTGGCG GCCAAGGCCG CGGCCCCCAT CGGCGTGGTG
ATGACCCTGA TGGCGCTCTT TACCGGTGCC ATCTGGGGCC AGCCCATGTG GGGCACCTGG
TGGGAATGGG ACCCGCGCCT GACCTCATTC CTGATCCTGT TCCTGTTCTA TCTCGGCTAT
ATGGCGCTGT GGTCGGCGAT CGAAAACGCC GACACCGCCG CCGATCTGAC CTCGATCCTG
TGTCTCGTGG GCTCGGTCTT TGCGGTGCTC AGCCGCTATG CGGCGAATTT CTGGAACCAG
GGGCTGCACC AGGGCGCGAC CCTGTCGCTC GACAAGGAAG AGAACATCTC GGATGTGTTC
TACTTCCCGT TGCTGTTCTG CCTTGCGGGC TTCGTGCTGC TGTTCGTGAC GCTGCTTCTG
GTGCGGACGC GGACGGAAAT CCGCGCGCGG CGCCTGTCGG CCCTGCGCCT GCGGGAGCGG
CAAGCCGCAT GA
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| Protein sequence | MSLWEYANPK KFMQTSSAVL PFVAVLTVVC LTVGLTWGFF FTPDDFRQGS TVKIIYLHVP
SAMMAINIWV MMLVTSLIWL IRRHHVSVLA AKAAAPIGVV MTLMALFTGA IWGQPMWGTW
WEWDPRLTSF LILFLFYLGY MALWSAIENA DTAADLTSIL CLVGSVFAVL SRYAANFWNQ
GLHQGATLSL DKEENISDVF YFPLLFCLAG FVLLFVTLLL VRTRTEIRAR RLSALRLRER
QAA
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