| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1852 |
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| Symbol | |
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| ID | 5712844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1932907 |
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| End bp | 1933446 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641267776 |
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| Product | putative thioredoxin |
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| Protein accession | YP_001533195 |
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| Protein GI | 159044401 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
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| TIGRFAM ID | [TIGR00385] periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.175078 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.495272 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAGGC GTGAGGCGCT GCTCACGGGC GGTGCGGTCC TCGCCAGCGC CGGAGCGGGC
TACATCGCTT CGACCGTCTT TCTGCGCGAC GACGCCCCCC CACCGCCCGA GCCCGGCGCG
CGCGCAGGCC GGCCCGCGCC GCCGCTGACC CTCGGGCCGC TGCGCGATCA GCCGTTCCTG
ACCTATGCCG ACCTGACCGT GCCGGGGCCG AAACTGGTCA ACTGGTGGGC CAGCTGGTGC
GCGCCCTGCC GGGCGGAGCA TCCCAGCCTG ATGGCGCTCG CCGCCGAGGG TGTGCCGATC
CACGGGATCA CCCATCGCGA CACCGAGGCC GACAGCCTCG GCTTTCTCGC GGAGCTCGGC
TCCCCCTTCG CCAAGCTCGG CGCGGACACG ACGCTTGCGA CCTATCGCGA CTGGAACCTC
ACGGGCCTGC CGGAGACCTA TGTCCTGAAC GGAGAGGGGC GGGTGGTTCT GCGCCATGCC
GGGCCGGTGC TGTCGAACAT CGTGCGGGAT TATATCCGGC CCGCCCTTGC GGCGGTCTAG
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| Protein sequence | MRRREALLTG GAVLASAGAG YIASTVFLRD DAPPPPEPGA RAGRPAPPLT LGPLRDQPFL
TYADLTVPGP KLVNWWASWC APCRAEHPSL MALAAEGVPI HGITHRDTEA DSLGFLAELG
SPFAKLGADT TLATYRDWNL TGLPETYVLN GEGRVVLRHA GPVLSNIVRD YIRPALAAV
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