| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1837 |
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| Symbol | |
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| ID | 5712829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1917978 |
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| End bp | 1919549 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641267761 |
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| Product | yjeF related protein |
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| Protein accession | YP_001533180 |
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| Protein GI | 159044386 |
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| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
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| COG ID | [COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase |
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| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGAAC TCCTGACAGC GGCCCGGATG CGGGCCATCG AGCAGGCCGC GATGGACAGT
GGCGCGGTCA CCGGGCTGGA GTTGATGGAG CGCGCCGGGC GCGGCGTGGT CGAGGCGGTC
TTTGCCCAAT GGCCGGATCT GGCGGCGGCC CCGCGCCGCG CGCTGGTGCT CTGCGGGCCG
GGCAACAATG GCGGCGACGG GTTCGTGATC GCGCGCTTGT TGTACGGCTG GGGCTGGGCG
GTGGAGGTGT GTCTCTACGG CGATCCCGAG AAGCTGCCGC CCGACGCGCG GGCAAATCAC
GACCGGTGGT GCGCGCTCGG CCCGGTGACG GTGCATGCGA TCGACTCTGC GCCGCCGCAG
GACGACAGCC TCGCCGTGCC CGAACGGGTC GACCTGCTGG TCGATGCGCT TTTCGGGACG
GGGCTGGGGC GGCCCTTCAC CGGGCCTTTC ACGGTCTTCG CCGCGCCCGC GGTGCGCGCA
CAGTTGCGGG CGGATGCAAC CCGTGCGGTG GCGGTCGATC TGCCCAGCGG GCTCTGTTCG
GACAGCGGCC GCATTCTCGG GACCGCGCTG CCTGCCGACC TGACCGTGAC ATTTCATGCC
TGCAAATGCG GCCATTGGCT CGGCGATGGG CCGGCGCTCT GCGGCAAGAC CGTCGTGGCG
GGTATCGGCC TCGACCGGAC GCCGCCCGCG CGGGCGGAGG ACGGCGTTCA TGCGGTCGGA
GCCCCCGCGG CGCGGGCGCT GGCCAAGGGT GCGGAGGATC ACAAATATGG CCATGGGCAT
GCGCTGGTAC TGTCCGGGCC GATGGGGCGT TCGGGTGCCG CGCGCCTTGC GGCGCGGGGG
GCGTTGCGGG TCGGCGCTGG GCTGGTGACG GTGGGCGCGC CGGGCGCGGC GATGATGGAA
TGCGCCACGC AACTGACCGC GATCATGCTG CGGCGCTGCG ACGGGGCCGA GGGGCTGGCC
GCGGCGCTGG AGGATGCGCG GCTGACCACC CTGTGCCTCG GGCCCGGTCT GGGCATCGGG
GCGGAGACCC GGGCGCTGGT GGCGACCGCG CTGGCTGCGG GGCGGGCGAC CGTGCTGGAC
GCGGACGCGC TCAGTGCCTT TGCCGAGGCG CCCGATGCCC TGTTCCGCGA CCTGCATCCG
CACACGGTGC TGACCCCCCA TGGCGGCGAG TTCGCGCGGC TCTTTCCGGA TATCGCCGAG
AAACTCGCTG CCCCTGCCAC CAGGGGTCCG GCCTACTCCA AAGTTGATGC CACCCGGGCG
GCGGCGGCGC GGGCGGGCTG TACGGTGCAC TACAAGGGGC CCGATACGGT CATCGCGTCG
CCGGACGGGC GCTGTGCGAT CAACGCGGCG GCCTATGCGC GCGCGGCCCC CTGGCTGGCG
ACCGCCGGGT CCGGCGATGT GCTGGCCGGG ATGATCACGG GGCTTCTGGC GCGCGGGCTT
CCCCCCCAGG AGGCTGCCGA GACCGGCGCC TGGCTTCATG TCGAGGCCGC CCGCGCCTTC
GGTCCGGGCC TGATCGCCGA GGACCTGCCG GAGATGCTGC CGCAGGTGAT CCGCGCCCTC
GATACGCCGT AG
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| Protein sequence | MTELLTAARM RAIEQAAMDS GAVTGLELME RAGRGVVEAV FAQWPDLAAA PRRALVLCGP
GNNGGDGFVI ARLLYGWGWA VEVCLYGDPE KLPPDARANH DRWCALGPVT VHAIDSAPPQ
DDSLAVPERV DLLVDALFGT GLGRPFTGPF TVFAAPAVRA QLRADATRAV AVDLPSGLCS
DSGRILGTAL PADLTVTFHA CKCGHWLGDG PALCGKTVVA GIGLDRTPPA RAEDGVHAVG
APAARALAKG AEDHKYGHGH ALVLSGPMGR SGAARLAARG ALRVGAGLVT VGAPGAAMME
CATQLTAIML RRCDGAEGLA AALEDARLTT LCLGPGLGIG AETRALVATA LAAGRATVLD
ADALSAFAEA PDALFRDLHP HTVLTPHGGE FARLFPDIAE KLAAPATRGP AYSKVDATRA
AAARAGCTVH YKGPDTVIAS PDGRCAINAA AYARAAPWLA TAGSGDVLAG MITGLLARGL
PPQEAAETGA WLHVEAARAF GPGLIAEDLP EMLPQVIRAL DTP
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