Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1831 |
Symbol | |
ID | 5712822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 1911041 |
End bp | 1911544 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641267754 |
Product | putative universal stress protein |
Protein accession | YP_001533174 |
Protein GI | 159044380 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.322893 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACAGA TGATCACCCA CATCCTGTGC GCGACCGACC TGTCCAAGCA CTCGGCCTAT ACCATGTGCC ACGCGGCCAA CCTGGCGGCG GTGACCGGCG CCAAGCTGCA CCTGGTGCAC GCGGTCCAGC CGATGAGCGA CGAGACCCGG ATCGCGCTGC AACTCTACAT GCAGACCACC GGATCCAGCG AAACCGCCGA CAAGGCCCGG CATGCCCATC TCAAGACTGT CATGGCCGAG CGCCAGCGCG AATTCTGGGC CCATGTCAGC GAGGAAGACC GCGACATCCA GAACCAGGTG GCGTCGATCG AGCTGGTCGA TGGCCACCCG GCCGAGGTCA TCCTGCGCCG GGCGACCGAA CTGGAATGCG ACCTGATCGT GCTGGGGGCC CATGAACACG GCTTCTCGCA CACCTTCCTC GGCACCGTCG CGAAACGCGT TCTGCGCCGA TCCACCATTC CGACGCTCGT GGTCCCGTAT CGCGATACCG CCCCGAGCGC CTAG
|
Protein sequence | MKQMITHILC ATDLSKHSAY TMCHAANLAA VTGAKLHLVH AVQPMSDETR IALQLYMQTT GSSETADKAR HAHLKTVMAE RQREFWAHVS EEDRDIQNQV ASIELVDGHP AEVILRRATE LECDLIVLGA HEHGFSHTFL GTVAKRVLRR STIPTLVVPY RDTAPSA
|
| |