| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1820 |
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| Symbol | |
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| ID | 5712811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1898151 |
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| End bp | 1898933 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641267743 |
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| Product | mannosyl-3-phosphoglycerate phosphatase |
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| Protein accession | YP_001533163 |
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| Protein GI | 159044369 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3769] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01484] HAD-superfamily hydrolase, subfamily IIB
[TIGR01486] mannosyl-3-phosphoglycerate phosphatase family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00552439 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.470118 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCTG CGCCCTCCTT GCTGGTTTTC ACCGATCTCG ATGGCACCTT GCTGGACCAT
GACAGCTATG GCTACGGGCC TGCCCTGCCC GCGCTGGACG CGCTGAAGGC GCGGCGGATC
CCCCTGGTGC TGGCCAGCTC CAAGACCGCC GCGGAAATCG CACCCTTGCG GGCGAAGCTG
GGCCGCGAGG ACTGCCCGGC GATTGTCGAA AACGGGGCCG GGATCCTGCC GGCCCATGCC
GCGCCGGAGG CGGGGGCGGC GGATTACGCC CGGCTGCGCG CGGTGCTGGA TGGGTTGGCG
CCCGGGATGC GGGCGCGGTT TTGCGGCTTC GGGGACATGG ATGCCGCCGG GGTGGCGGCG
ATCACCGGGC TGCCCGACGC GCAGGCGGCC CTGGCCCGGC GGCGCGCGTT TTCCGAGCCG
GGGGTCTGGG ACGGCACGCC CGCGCAGGAG GCGGATTTTG TCGCCGCCCT GGCCGCGCGG
GGCGTGCAGG CCCGGCGGGG GGGGCGGTTT CTGACCCTGT CCTTCGGCGG CACCAAGGCC
GACCGGATGG CCGAGATCGT TGCGCAGTAC CGTCCCCGTC GGACGCTGGC GTTGGGGGAT
GCGCCCAACG ATATCGAGAT GCTGGAGGCC GCGGACCGGG GCGTGATCGT GGCCAACCCC
CATGGCACGC CCCTGGCCCC CCTGCCCGGA GAGGCGGACG GGCGTATCAG TCGCACCTCG
AAACCGGGTC CGGAAGGTTG GAACGCCGCC GTGTGCGCCG TACTGTCGGG GCTGGGTGCA
TGA
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| Protein sequence | MSAAPSLLVF TDLDGTLLDH DSYGYGPALP ALDALKARRI PLVLASSKTA AEIAPLRAKL
GREDCPAIVE NGAGILPAHA APEAGAADYA RLRAVLDGLA PGMRARFCGF GDMDAAGVAA
ITGLPDAQAA LARRRAFSEP GVWDGTPAQE ADFVAALAAR GVQARRGGRF LTLSFGGTKA
DRMAEIVAQY RPRRTLALGD APNDIEMLEA ADRGVIVANP HGTPLAPLPG EADGRISRTS
KPGPEGWNAA VCAVLSGLGA
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