| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1817 |
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| Symbol | |
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| ID | 5712807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1895702 |
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| End bp | 1896640 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641267739 |
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| Product | pirin-like protein |
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| Protein accession | YP_001533160 |
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| Protein GI | 159044366 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1741] Pirin-related protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.123159 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.257408 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTGGA ACCCCGCCCT CGACCCCCAT TGCCCCCTCG GCGACGAGGT GGACGCCATC
GACACCCTGA TCATTCCCCG CGCCCGCGAT CTCGGCGCGC TGGAGGTGCG CCGTGCGCTG
CCCGCGCCCA AGCGCCAGAT GGTCGGCCCG TTCATCTTCT TCGACCAGAT GGGCCCGGCG
GAGTTTCTGC CCACCAAGGG GCTCGACGTG CGCCCGCATC CCCATATCGG GCTCGCGACC
ATCAGCTATC TCTACCGCGG CCGGATGCAC CACCGCGACA GCCTCGGCAC CGATGCCTGG
ATCGAACCGG GGGCGGTGAA CTGGATGGTG GCGGGCCACG GCATCACCCA TTCCGAACGC
ACCGACGACG AAACCCAATC CGAACCGATG CCCTTTTTCG GCATCCAGAC CTGGGTCGCG
CTGCCCAAGG ATCACGAGGA TCGCGCCCCC GAATTCCAGC ACGCGCCCGC AGAGGCGCTC
CCCTTCATGG AAGGCGAGGG CAAGCAGGTC CGCCTGATCC TCGGGAATGC CTATGGCGAG
CGCGCCCCGG TCAAGACCGC CTCGGAGATG TTCTATGCCG ATGCGGTGCT GCAGCCGGGC
GCGAAACTGC CCCTGCCGGA CGATCACGAG GATCGCGGCA TCTACGTGGT CGAAGGGTCG
ATCGCAGTGG CGGGCGAGAC CTACGCGGCG GGCCGGATGA TGGTCTTCCG CCCCGGCGAC
CGGATCTCGG TGACCGCGGG CGGGCAGGGC GCGCGGCTGA TGCTGCTGGG CGGCGAGACC
CTGGAGGGGT CGCGCTATAT CTGGTGGAAC TTCGTGGCGT CGTCGAAGGA GCGGATCGAG
GAGGCCAAGG AGGCCTGGCG CGCGGGCGAC TGGGAACACG GCCGCTTCCA GCTGCCGCCC
GGCGACGACC AGGAGTTCAT CCCCGCCCCC GAGCGGTGA
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| Protein sequence | MSWNPALDPH CPLGDEVDAI DTLIIPRARD LGALEVRRAL PAPKRQMVGP FIFFDQMGPA
EFLPTKGLDV RPHPHIGLAT ISYLYRGRMH HRDSLGTDAW IEPGAVNWMV AGHGITHSER
TDDETQSEPM PFFGIQTWVA LPKDHEDRAP EFQHAPAEAL PFMEGEGKQV RLILGNAYGE
RAPVKTASEM FYADAVLQPG AKLPLPDDHE DRGIYVVEGS IAVAGETYAA GRMMVFRPGD
RISVTAGGQG ARLMLLGGET LEGSRYIWWN FVASSKERIE EAKEAWRAGD WEHGRFQLPP
GDDQEFIPAP ER
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