| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1804 |
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| Symbol | |
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| ID | 5712792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1875927 |
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| End bp | 1878011 |
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| Gene Length | 2085 bp |
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| Protein Length | 694 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641267724 |
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| Product | putative competence protein |
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| Protein accession | YP_001533147 |
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| Protein GI | 159044353 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0658] Predicted membrane metal-binding protein |
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| TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.254027 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.193881 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCCAAT ACGCAGAGGT ACGGCAGGTG CTGTTCCCCT GGGCCCCCGT GGTGCTGGGC
TGCGGGATGC TGGCCTATTT TCTGCCCGCG GGCGAGCCGT CCCTGGCGGT GCTGCGGCTG
GTGTGGTCCT GTGCTGCCTT CGGCCTGCTC TGGGGGCTCT TTGCGCCCTG GTCCCTGCGG
CCCCTGGGCT GGGCGCTGGC GCTGGCGGCG GGGGGCTACG GGCTCGCGGC CTGGCGCACG
GCGGATGTGG CCGCCTCGGT GCTGCCCTTT CGCTATTACG GGCCGATCGA GGGGCGCATC
GTCGAGATCG ACAGCTCCTA TGCCGGGGCG ATGCGCCTGA CCCTCGCGGA TGTGCGGCTG
GAGGATGTCG CGCCCGACCG CCGCCCGGCG CAGGTGCGGG TGTCGCTCCA CGGGCCGTTG
CCCGAGGTGC CGCTACGCCC GGGCCAGGTC GTGATGACCA CCGGGCATCT GTCGCCGCCC
AACGCGCCGG TGGAGCCGGG CGGCTTCGAC TTTCGCCGCC ATGCCTGGTT CGAGGGGCTG
GGGGCCGTGG GCTACACCCG CGTGCCCGTG GTCCTCTGGG CGGAGCCTGC GCAGCTGAGC
TTCGCCGAGC GTGTCTACGA GACCCGGCTG AAGCTGTCCA AGGCGATCCG CGACCGGATC
GCGGGCCAGC CCGGGGCCTT CGCCTCGGCG ATCATCACCG GCGACCGGGC GGCCATCGAC
CGCGCCCATG TCGAAGACCT GCGCGGCTCG AACCTTGCCC ATCTGCTGGC GATCTCCGGC
CTGCATATGG GGTTGCTCAC GGGTACGGTG TTTCTGGGCC TGCGCAGTCT AATGGCGCTG
TGGCCCTGGC TGGCGCTGCG CGTGCCGGTC AAGAAGGTGG CGGCGGTCTG CGCCCTGGGC
GCGGCGGTCG TCTACCTGTT CATCTCGGGC ATGAGCGTGG CGACGGAGCG GGCCTTCATC
ATGGTGGCGA TGATCCTGGT GGGCGTGTGT TTCGACCGCC GGGCGCTGTC CCTGCGTTCG
GTCGCCTGGG CGGCGCTGCT GGTGCTGGCG CTCAGGCCCG AGGCGGTGCT GGGCCCGGGG
TTCCAGATGT CGTTTGCCGC GACCACGGCG CTGGTCATCA CCTATGCCCA TCTGCGCGAT
GTGCGCTGGT GGCGGGGCAT TCCGAAATGG GCCAAGGGGA CGGCCTCGCT CTTGCTGTCC
TCGGCGGTGG CGGGGGCGGC CACGGCCCCC ATTGCGGCGG CGCATTTCAA CATCGTCGGC
CATTACGGGC TGATCGCGAA CCTGGCCTCG GTGCCGGTCA TGGGCACGCT GGTGATGCCC
GGCGCGCTGG TGGCGCTGGC GGGCGTGCCC CTGGGGCTGG AGGGGGTCGG TCTCTTCGCG
ATGGAGGTCG GGATCCGCTG GATCCTCTGG GTGGCCGGCA CGGTCGCGGG GCTGGAGGGG
GCGGTGGGCC ATGTGGTCCG CCCGATGCCC GTGGTGCTGC CGTTGATCGT GCTGGGAGCG
CTGGTGGTGG GGCTTTTGCC CTGGCGGGCG CGATGGGCGG GGCTGGCGCC GGTGGTGCTG
GCCCTGGGGC TCTGGACCCA GTCCGACCGG CCAGAGCTGC TGATCTCCGA CACGGGCGGG
CTGCTGGGCG TGATGACCGA GCAGGGACGC GCGCTCAGCA AGGGCCGCGG TGACGGGTTC
GCGGCGCGCA ACTGGCTGGA GAATGACGGC GACGGGGTGA CGCAGGACGT GGCGGCGGCG
CGCGCGGGGA TCGAGGCGGG CAAGGGGACG GTCAGCGTGG CCCTCGGGCC CTACCGGGTG
ATCCAGCTGC GCGGCAAGAC CGGTGCGGCG CAGTTTCCGG AGGCCTGTGC CACGGCGGAC
CTGGTGGTGG CCAACACGCG GCTGCCGCGC AGCACCGGGG CCTGCGAGAG CATCGACGCC
TGGGATCTGC GCCGGACAGG TGCGCTGGCG GTGTCGGTGA CCGAGGACGG GTTGCAGGTG
GTCCGCGCGA AGTCCGCAGA AGAGCAGCGG ATGTGGACCG GGGCCGCACG TGCGACCACG
CCGGGCCGCC TGGCCCGCGC GCCGGGCGCG GAGCCGACCC GCTGA
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| Protein sequence | MTQYAEVRQV LFPWAPVVLG CGMLAYFLPA GEPSLAVLRL VWSCAAFGLL WGLFAPWSLR
PLGWALALAA GGYGLAAWRT ADVAASVLPF RYYGPIEGRI VEIDSSYAGA MRLTLADVRL
EDVAPDRRPA QVRVSLHGPL PEVPLRPGQV VMTTGHLSPP NAPVEPGGFD FRRHAWFEGL
GAVGYTRVPV VLWAEPAQLS FAERVYETRL KLSKAIRDRI AGQPGAFASA IITGDRAAID
RAHVEDLRGS NLAHLLAISG LHMGLLTGTV FLGLRSLMAL WPWLALRVPV KKVAAVCALG
AAVVYLFISG MSVATERAFI MVAMILVGVC FDRRALSLRS VAWAALLVLA LRPEAVLGPG
FQMSFAATTA LVITYAHLRD VRWWRGIPKW AKGTASLLLS SAVAGAATAP IAAAHFNIVG
HYGLIANLAS VPVMGTLVMP GALVALAGVP LGLEGVGLFA MEVGIRWILW VAGTVAGLEG
AVGHVVRPMP VVLPLIVLGA LVVGLLPWRA RWAGLAPVVL ALGLWTQSDR PELLISDTGG
LLGVMTEQGR ALSKGRGDGF AARNWLENDG DGVTQDVAAA RAGIEAGKGT VSVALGPYRV
IQLRGKTGAA QFPEACATAD LVVANTRLPR STGACESIDA WDLRRTGALA VSVTEDGLQV
VRAKSAEEQR MWTGAARATT PGRLARAPGA EPTR
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