| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1803 |
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| Symbol | lexA |
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| ID | 5712791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1875043 |
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| End bp | 1875738 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641267723 |
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| Product | LexA repressor |
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| Protein accession | YP_001533146 |
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| Protein GI | 159044352 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
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| TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00193546 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.136628 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGACCA GAAAGCAGAT CGAATTGCTG GAGTTCATTC ACAAGCGATT GCAACGCGAC
GGGGTGCCCC CGTCCTTCGA CGAAATGAAA GACGCGCTGG ACCTGCGGTC GAAATCGGGA
ATCCACCGGT TGATCACGGC GCTCGAGGAA CGCGGATTCA TCCGCAGGCT CGCGCACAAG
GCACGGGCGA TCGAGATTGT GAAATTGCCC GAGGCCCTGA TGGGATCGAT GCAGGGCGGG
TTCGCCCCGC AGGTGATCGA CGGTGACCGT CTGGACCCAC CCGTCGGGGC GATGCCGGTG
TCGGGCATTC ACGCGGTGGA GTTGCCCGTG ATGGGCAAGA TCGCCGCCGG CACACCGATC
GAGGCGATCA GCGAAGTGTC CCATACGGTG GCCGTGCCCG GGCAGATGAT GCGCCAGGAC
GCGGAGCATT ACGCGCTGGA GGTGAAGGGC GACTCGATGA TCAATGCCGG GATCAACAAT
GGCGACATCG TGGTGATCCG GGAGACGAGT GTTGCCGAGA GCGGAGATAT CGTGGTCGCA
CTTGTCGACG GGCACGAGGC GACGCTGAAG ACCCTGCGCA AGCGCGGTAA CGCGATCGCG
CTGGAGGCGG CGAACCCCGC CTATGAAACA CGGGTCTACC CGGCCGAAAT GGTGCGGGTG
CAGGGCAAGC TGGTCGGGCT GATCCGCTCC TACTGA
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| Protein sequence | MLTRKQIELL EFIHKRLQRD GVPPSFDEMK DALDLRSKSG IHRLITALEE RGFIRRLAHK
ARAIEIVKLP EALMGSMQGG FAPQVIDGDR LDPPVGAMPV SGIHAVELPV MGKIAAGTPI
EAISEVSHTV AVPGQMMRQD AEHYALEVKG DSMINAGINN GDIVVIRETS VAESGDIVVA
LVDGHEATLK TLRKRGNAIA LEAANPAYET RVYPAEMVRV QGKLVGLIRS Y
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