| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1800 |
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| Symbol | trpC |
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| ID | 5712788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1872395 |
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| End bp | 1873210 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641267720 |
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| Product | indole-3-glycerol-phosphate synthase |
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| Protein accession | YP_001533143 |
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| Protein GI | 159044349 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00000789952 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.147475 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACA CCATTCTCGA CCGGATCAAG GCCTACAAGC TGGAGGAAGT GGCCGCGCGC
AAGGCCGCCC GCCCCCTGGC GGAGGTCGAG GCGGCCGCGC GCCAAGCCTC CCCCGTCCGG
CCCTTCGCGG GCGCGCTGCG GGCGGCGGCC CAGAACGGTT ATGCCCTGAT CGCGGAGGTC
AAGAAGGCGA GCCCCTCCAA GGGTCTGATC CGCGCCGATT TCGACCCGCC CGCGATTGCC
CGCGCTTACG CGGCCGGGGG CGCGGCCTGC CTGTCGGTGC TGACCGATGC GCCGAGCTTC
CAGGGGCATG AGGACTACCT CGTGGCGGCG CGCGCGGCCT GCGCCCTGCC CGTCCTGCGC
AAGGATTTCA TGTATGACCC CTACCAGGTG CCCGAGGCCC GGGCGATGGG CGCGGACTGC
ATCCTGATCA TCATGGCCAG CGTGTCGGAC GCCCAGGCCG TCGAGTTGGA GGATGCCGCG
ACAAGCTGGG GCATGGATGC ACTGATCGAG GTGCATGACG GCGACGAACT GGACCGCGCC
CTGCGGCTGA ACTCGCCCCT GATGGGGATC AACAACCGCA ACCTCAAGAC GTTCGAGACG
ACCTTGGACA CCACCCGCAC CCTGGCGCCG CGTATCCCCG GCGACCGGAT GATCGTGGCG
GAATCGGGCC TGAGCGGGCC GACGGAGCTT GCCGATCTCG CGGGCTACGG CGCGCGCACC
TTCCTCATTG GCGAAAGCCT GATGCGGCAG GCGGATGTGG CCGAGGCCAC GCGCGCGCTG
CTCGCCAACC CGGTTCCCGT GGAGGGCGCG GCATGA
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| Protein sequence | MTDTILDRIK AYKLEEVAAR KAARPLAEVE AAARQASPVR PFAGALRAAA QNGYALIAEV
KKASPSKGLI RADFDPPAIA RAYAAGGAAC LSVLTDAPSF QGHEDYLVAA RAACALPVLR
KDFMYDPYQV PEARAMGADC ILIIMASVSD AQAVELEDAA TSWGMDALIE VHDGDELDRA
LRLNSPLMGI NNRNLKTFET TLDTTRTLAP RIPGDRMIVA ESGLSGPTEL ADLAGYGART
FLIGESLMRQ ADVAEATRAL LANPVPVEGA A
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