| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1799 |
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| Symbol | trpD |
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| ID | 5712787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1871379 |
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| End bp | 1872398 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641267719 |
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| Product | anthranilate phosphoribosyltransferase |
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| Protein accession | YP_001533142 |
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| Protein GI | 159044348 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0547] Anthranilate phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01245] anthranilate phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0000601677 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.211733 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACG CGCTGAAACC CCTGATCGGG GCCGCCGCCG ACCGTCCCCT GACCCGGGCG
GAGGCCGAGG CGGCCTTCGA GATCCTGTTC GAGGGCGAGG CGACGCCGAG CCAGATGGGC
GGGCTGCTGA TGGCGCTGCG TACGCGCGGC GAGACGGTGG CGGAATACGC AGCCGCGGCC
GCGGTGATGC GCGCCAAATG CAATGCAGTG CGCGCGCCCG AAGGCGCGAT GGACATCGTC
GGCACCGGGG GCGACGGCAA GGGGACGCTG AACATCTCCA CCGCGACGGC CTTCGTGGTG
GCGGGCGCGG GCGTGCCCGT GGCCAAGCAT GGCAACCGCA ATCTCAGCTC GAAATCCGGG
GCGGCGGATG CGCTGGCGCA GATGGGGATC GAGGTCATGG TCGGCCCGGC GGTGGTCGAG
CGGGCGTTGT CGGAGATCGG CATCGCCTTC ATGATGGCGC CGATGCACCA CCCGGCGATC
CGGCACGTCA TGCCCACGCG GGCCGAGCTG GGCACGCGGA CCATGTTCAA CATCCTCGGC
CCCCTGACCA ACCCGGCAGG CGTCAAGCGG CAGCTGACCG GCGCGTTCTC CCGCGACCTG
ATCCGGCCCA TGGCCGAGAC CCTGGCGGCG CTCGGCTCGG ACGTGGCCTG GCTGGTTCAC
GGCTCGGACG GCACCGACGA GCTGACGATT ACGGGCGTGT CCTGGGTGGC GGGGCTGTCG
GACGGGGCGG TGACCGAGTT CGAGGTCCAT CCCGAAGAGG CCGGCTTGCC GGTCCATCCG
TTCGAGGCCA TCCTCGGGGG CACGCCCGAG GAAAACGGCG CCGCCTTCCG CGCGCTTCTG
GCCGGGGAGG CGTCGGCCTA CCGAGACGCG GTGCTCTTGA ACGCCGCGGC GGCACTGAAG
GTCGCGGGGC GCGTCACCGC CCTGCCCGAT GGCGTGATGC TGGCGGCGGA GGCGATCGAC
AGCGGCGCGG CCCTGGCCAA GGTGCAGGGG CTGGCACAGA TCACATCGGA GGCGACATGA
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| Protein sequence | MSDALKPLIG AAADRPLTRA EAEAAFEILF EGEATPSQMG GLLMALRTRG ETVAEYAAAA
AVMRAKCNAV RAPEGAMDIV GTGGDGKGTL NISTATAFVV AGAGVPVAKH GNRNLSSKSG
AADALAQMGI EVMVGPAVVE RALSEIGIAF MMAPMHHPAI RHVMPTRAEL GTRTMFNILG
PLTNPAGVKR QLTGAFSRDL IRPMAETLAA LGSDVAWLVH GSDGTDELTI TGVSWVAGLS
DGAVTEFEVH PEEAGLPVHP FEAILGGTPE ENGAAFRALL AGEASAYRDA VLLNAAAALK
VAGRVTALPD GVMLAAEAID SGAALAKVQG LAQITSEAT
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