| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1782 |
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| Symbol | |
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| ID | 5713350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1851151 |
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| End bp | 1852302 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641267701 |
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| Product | putative ring-hydroxylating dioxygenase subunit alpha |
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| Protein accession | YP_001533125 |
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| Protein GI | 159044331 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.218178 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGACA CCGCCGCAGA GACCATGCCA GAGCCTCCCG CCGCCCCGGC GCGCGGCCTG
CCCAACGCTC ATTACACAGA CCCAGACATG CACAGGGCCG AGCAGCACGC GCTGCTCGCC
GCGCAGTGGG CCGGGCTCGC AGTGGCTTCG GACGTGCCCG CCCCCGGCGA TGCCTTGCCC
CTGACCTTCT GCGGCGAGCC GCTCTTGCTG CTGCGCGACC GCGCAGGCCA GGTGCGCGTG
TTCTACAATG TCTGCCGCCA CCGGGGCATG ATCCTTGTCG ACGCCCCCCG CCGGATCGAG
GGCGCGATCC GCTGCCCCTA TCATTCGTGG TGCTACGCCA CCGATGGACG CCTCGTCACC
ACCCCCCATG TGGGCGGGCC GGGCCGCAAC ACCCATGCCC GGATCGACCG CGCCACCCTC
GGGCTGATCG AGGTGCCCTC CCATGTCTGG CGCGATGTGG TCTTTGTGAA CCTGTCGGGC
ACCGCCCCGC CCTTCGCCGA GGCCAATGCC GACCTCATCG CCCGCTGGGC CGCCCTGGAC
CAGCCCCTGC ACCATGGCGG AGCAGACAGC CGCTTCACCC TGACCGTGCG ATGCAACTGG
AAACTCGCGG TGGAAAACTA TTGCGAAAGC TATCATCTGC CCTGGGTTCA CCCCGGCCTG
AACGAGATCT CGCGGCTCGA AGACCACTAC AACATCGAGA CCCCCGGCGC TTTCTCCGGC
CAGGGGACCG AGGTCTACCA ACGGCCCCGC CGCCCCGACG GCACCCCGGC CTTCCCGGAT
TTTACCGGCC TGCCTGCCAT GTGGGACACC GGGGCGGAAT ACGTGGCGCT CTATCCCAAC
GTTCTGCTCG GCGCGCACCG GGATCACGCC TTCGCCATCC TGCTCCACCC CGATGGTCCG
ACCCGCACCC GGGAGCATGT GCACCTCTAC TATGCCGCGC CCGACACCGA CCCGGCCGCC
CGCGCCGCCA ATGCCGCCCA GTGGAAAACC GTGTTCGAAG AGGACGTCTT CGTGGTCGAG
GGGATGCAGA GCGGCCGCGC TGCGCGCGGG TTCGACGGCG GCACCTTCTC CCCGGTCATG
GACGGGCCGA CCCGGTGCTT CCACGCCTGG GCCGCCGCCG CGCTGTCCGA GACGTCCCGT
GCGGCCGAGT GA
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| Protein sequence | MPDTAAETMP EPPAAPARGL PNAHYTDPDM HRAEQHALLA AQWAGLAVAS DVPAPGDALP
LTFCGEPLLL LRDRAGQVRV FYNVCRHRGM ILVDAPRRIE GAIRCPYHSW CYATDGRLVT
TPHVGGPGRN THARIDRATL GLIEVPSHVW RDVVFVNLSG TAPPFAEANA DLIARWAALD
QPLHHGGADS RFTLTVRCNW KLAVENYCES YHLPWVHPGL NEISRLEDHY NIETPGAFSG
QGTEVYQRPR RPDGTPAFPD FTGLPAMWDT GAEYVALYPN VLLGAHRDHA FAILLHPDGP
TRTREHVHLY YAAPDTDPAA RAANAAQWKT VFEEDVFVVE GMQSGRAARG FDGGTFSPVM
DGPTRCFHAW AAAALSETSR AAE
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