| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1779 |
|---|
| Symbol | ilvI |
|---|
| ID | 5713347 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 1848348 |
|---|
| End bp | 1850105 |
|---|
| Gene Length | 1758 bp |
|---|
| Protein Length | 585 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641267698 |
|---|
| Product | acetolactate synthase 3 catalytic subunit |
|---|
| Protein accession | YP_001533122 |
|---|
| Protein GI | 159044328 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
|---|
| TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0502039 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGC AGATGACCGG CGCACAGATG GTGGTTCAGG CCCTGAAGGA TCAGGGTGTG
GACACGGTAT TCGGCTATCC GGGCGGGGCG GTTCTTCCGA TCTATGACGA GATTTTCCAG
CAGAACGAGA TCAAGCACAT CCTCGTGCGC CACGAACAGG CCGCGACCCA CGCCGCCGAG
GGCTATGCCC GCTCGACCGG CAAGCCGGGC GTGGTGCTCG TCACGTCGGG CCCCGGGGCC
ACCAACGCCG TGACCGGCAT CACCGACGCG CTGATGGACA GCATCCCCAT GGTCGTGCTC
TCGGGCCAGG TGCCCACCTT CATGATCGGC AACGATGCCT TTCAGGAGGC CGATACCGTC
GGCATCACCC GCCCCTGCAC CAAGCATAAC TGGCTGGTGA AGGAAACCGA CCTGCTCGCC
GACACCATCC ACCAGGCCTT CCACGTGGCG ACCTCGGGCC GCCCGGGCCC GGTGCTGGTG
GACATCCCCA AGGACGTGCA GTTCGCCTCG GGCACATATG TCCCGCCCGC CAAGGCCGAC
ACGCGCCACT ACCAGCCCCG CGTCAAGGGC GACGTGGCCG CGATCACCGC CATGGTCGAG
CTGATGGAAA CCGCCGAGCG GCCGATTTTC TACACCGGCG GCGGCGTGAT CAATTCCGGC
CCGGCGGCGA GCCAACTGCT GCGCGAATTC GTGGCCGAAA CCGGCTTTCC GATCACCTCG
ACCCTGATGG GTCTCGGGGC CTACCCGGCC TCGGGCGAGA ACTGGATCGG CATGCTGGGC
ATGCACGGGC TCTACGAGGC CAACCTGGCC ATGCACGGCT GCGACGTGAT GATCAATATC
GGGGCGCGCT TCGACGACCG GATCACCGGG CGCGTGGCCG ATTTCTCCCC CGAATCCAAG
AAGATCCATA TCGACATTGA TCCATCCTCG ATCAACAAGG TGATCCGCAC CGATGTGCCG
ATCATCGGCG ACATCGCCCA TGTGCTCGAA GACGCCCTGC GCATCTGGAA GGCCCGCGGC
CGCAAGACCA ACAAGGCCGC GGTGAAGGCC TGGTGGACCC AGATCGAGGA ATGGCGCACC
GTGCGCTGCC TGGACTTCAA GAACTCCGAG ACCACGATCA AGCCGCAATA CGCCATGCAG
CGGCTGGAGG CCCTGACCAA GGACCACCCC AAGCGCTTCA TCGCGACCGA GGTGGGCCAG
CACCAGATGT GGGCCGCGCA GTATCTCGGC TTCGACGAGC CGAACCGGTG GATGACCTCC
GGCGGGCTCG GGACCATGGG CTATGGCTTC CCGGCCTCCA TCGGGGTGCA GGTCGCGCAT
CCGGACGCGC TCGTGATCAA CGTGGCGGGC GAGGCATCCT GGCTGATGAA CATGCAGGAA
ATGGGCACCG CGATCCAGTA CATGCTGCCG GTCAAGCAGT TCATCCTGAA CAACGAACGC
CTCGGCATGG TCCGCCAGTG GCAGGAGTTG CTGCACGGCG AGCGCTACAG CCATTCGTGG
TCCGATGCGC TGCCCGATTT CGTCAAGCTG GCCGAGGCCT TCGGGGCCAA GGGCATCCTT
TGCAAGGACC CCAAGGATCT CGACGACGCG ATCATGGAGA TGCTGGAGTA TGACGGCCCG
GTGATCTTCG ACTGTCTCGT GGAGAAACAC GAGAACTGCT TCCCGATGAT CCCGTCGGGC
GCGCCGCATA ACGAGATGCT GCTGGGCGAG GCGGACACGC AGGGCGCGAT CGGCGCCAAG
GGCGCGGTGC TGGTCTGA
|
|---|
| Protein sequence | MSTQMTGAQM VVQALKDQGV DTVFGYPGGA VLPIYDEIFQ QNEIKHILVR HEQAATHAAE
GYARSTGKPG VVLVTSGPGA TNAVTGITDA LMDSIPMVVL SGQVPTFMIG NDAFQEADTV
GITRPCTKHN WLVKETDLLA DTIHQAFHVA TSGRPGPVLV DIPKDVQFAS GTYVPPAKAD
TRHYQPRVKG DVAAITAMVE LMETAERPIF YTGGGVINSG PAASQLLREF VAETGFPITS
TLMGLGAYPA SGENWIGMLG MHGLYEANLA MHGCDVMINI GARFDDRITG RVADFSPESK
KIHIDIDPSS INKVIRTDVP IIGDIAHVLE DALRIWKARG RKTNKAAVKA WWTQIEEWRT
VRCLDFKNSE TTIKPQYAMQ RLEALTKDHP KRFIATEVGQ HQMWAAQYLG FDEPNRWMTS
GGLGTMGYGF PASIGVQVAH PDALVINVAG EASWLMNMQE MGTAIQYMLP VKQFILNNER
LGMVRQWQEL LHGERYSHSW SDALPDFVKL AEAFGAKGIL CKDPKDLDDA IMEMLEYDGP
VIFDCLVEKH ENCFPMIPSG APHNEMLLGE ADTQGAIGAK GAVLV
|
|---|
| |