| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1775 |
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| Symbol | |
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| ID | 5713342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1841055 |
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| End bp | 1843865 |
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| Gene Length | 2811 bp |
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| Protein Length | 936 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641267693 |
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| Product | putative glutamate--ammonia ligase adenyltransferase |
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| Protein accession | YP_001533118 |
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| Protein GI | 159044324 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[T] Signal transduction mechanisms |
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| COG ID | [COG1391] Glutamine synthetase adenylyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.659923 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTTCG AGACCCGCAT GACCCGCCTG CCGCTTCCCT TCGATCCAGA GCGGGGGGCG
GCGGCGGTCG CGGCCCATTG CCCCGAGGCC ACGGGGACCT TGCGCGATGC GTTGGTGGGG
ATGGCGGGGT CGAGCCCCTA TCTCGAAGGG TTGCTGGCCA AGGAGGCCGC CTGGTTTGCC
GCCGCGCTGG AGGATCCCGA GGCGGCGTTT GCGCAGATCC TCGCTGAGGT GCCGGAGATT
GCGCCGGACC AGATCAAGCC GGGGTTGCGG GTGGCCAAGC GGCGTGTCGC GCTGCTGGCG
GGGTTTGCCG ATCTTGCCGG GGTCTGGCCG CTGGAGGCGG TGACGGAGAA CCTGACGCTG
TTTGCCGATG CGACCATGGG CGCGGCCCTG CGCGCGGCCC TCGCGCCCGA GTTGCGCCGG
GGCAAGGTGC CGGGCCAGGG CGAGGCCGAC CTGCCGGAGG CGGCGGGGAT GGTGATGCTC
GCCATGGGGA AGATGGGGGC GTTCGAGCTC AACTATTCCA GCGATATCGA CCTGATCTGT
CTCTTCGACC AGGACCGGTT CGCGCCGGAC GCGTTCGGCG AGGCGCGGGC GGCCTTCGTG
CGGGCGACGC GCCGGGCGGT GGGGATCATG TCGGACCCGA CGGGCGATGG CTATGTCTTC
CGCACGGATC TGCGATTGCG GCCGGACCCG TCGGTCACGC CGGTCTGCAT CGCCATGGAA
GCCGCCGAGC GGTACTACGA ATCCCTCGGC CGCACCTGGG AGCGCGCGGC GCATATCAAG
GCGCGACCGG CGGTGGGCGA TCTGGAGGCG GGGGCGGGGT ATCTGGCCCG GCTGACCCCG
TTCATCTGGC GCAAGCACCT GGATTTCGCC GCCATCGAGG ATGCCCATGA CATGCGGCTG
CGCATCCGGG CGCATAAGGG GCTGCATGGG CCGGTGTCCC TGCCGGGGCA TGACATGAAG
CTGGGCAAGG GCGGCATCCG GGATATCGAG TTTTTCACCC AGACCCGGCA GATCATTTCG
GGCGGGCGGG ACCCGGACCT GCGGGTGCGC GGCACGGTGG CGGGGTTGGC GGTTCTGGCC
GAGAAGGGCT GGGTGCGGCC CGAGGATGCC GCGGTGCTGA GCGATCATTA CCGGGCCCAC
CGGGAGGTGG AGCACCGGGT GCAGATGATC GCCGATGCCC AGACCCATGC CCTGCCGAAG
GACGATGACG GGTTCCGGCG TCTGGCCTGC CTGACGGGGG AGGCCGACGT GGCCGGCTGG
CGGCGACAGC TCAAGGACCG GCTGGCGGAG GTCGCGGCCC TGACCGAGCC GTTCTTTGCG
CCCGAGCGGA GCGCGTCCAG CCCGCCGCCC GAGGCCGTGC CCGAGGGGGC CGCGGAGGTG
ATGGAGCGTT GGCGCAGCTA CCCGGCGCTG CGCTCGACCC GGGCTCTGGA GATTTTCGGC
CGGTTGCGCC CCGAGATCCT GTCCCGGCTC GGGCGGGCCG CGCGGCCCGA TGAGGCGTTG
CTGAACTTCG ACAGCTTCAT CAAGGGTTTG CCTGCGGGAG TTCAACTGTT CTCCCTGTTC
GAGGCGAACC CGTCCCTGAT CGACCTGATC GTGGATATCT GTGCCACGGC GCCCTTGCTG
TCGCGCTACC TTGCGGCCAA TTCCGGGGTC TTGGACGCGG TGATCGGGGG GCCGTTCTTT
GCGGACTGGC CCGGTGAGGC GGCCCTCGCG GCGGAACTGG AGGCGCGGCT GGCGCCGCTG
GACGATTACG AGCATCAACT CGATGCCGCG CGGCGCTGGC AAAAGGAATG GCATTTCCGC
GTCGGTGTGC ATCACCTGCG CGGCTTGGTC GATGCGCAGG TGGCGGCGGA GCAATACACC
GACCTGGCCG AAACGGTGGT CTCGGTGCTG TGGCCCCGTG TCGCCGCGGA GTTGTCGCGC
CGTCACGGGC CCCCGCCGGG ACGCGGGGCG GTGTTCGTGG GGATGGGCTC GCTTGGGGCG
CGGACGCTGA CGGCGCAGTC GGACCTCGAT GCGATCGTCG TCTATGACGG GGCGGGCGTG
GAGGCGTCGG AGGGGCGGCG GCCGCTGGCG CCGGGGCCGT ATTACGCCAA GCTGACCAAG
GCGATGATCA CGGCGCTGAC CGCGCCCATG GCCGAGGGGC GGCTTTACGA GATCGACATG
CGTCTGCGGC CGTCGGGGCG GCAGGGGCCG GTTGCGACCT CCTGGTCGGC CTTCCAGAGC
TACCAGGAGA GCGATGCCTG GACCTGGGAG CATCTGGCCC TGACGCGGGC GCGCGTGATC
GGCGGCGCGG GGCCGGAGTC CGGGGCCCTC GCCGAGGATC TGGAGGCGTT CCGCTGCGCC
TTGCTGCGCA GCAAGGGGCC CGGGCGGCAG GCGGAGGTCG CCCGCGATGT GGCCGACATG
CGCGCGCGGC TGGAAGCCGC AAAGCCCGCC GAGCGCCCGT TCGAGGCCAA GCAGGGCCCG
GGGCGGTTGC AGGATATCGA GCTTCTGGGT CAGGCGGCGG CCTTGTTGTC GGGGGCCGAG
TGCGCCGATA CCCGGTTGCA GCTGGCCGCC GGGGTCGCGG CGGGATGCCT GGGCCCGGAG
GAGGCGGCGG TGCTGACCGG GCAGCTTGCC CTGTTGCGGC AGGTGCAGAC CTCGGTCCGG
TTGCTGACCG ACGGGGCGCT GGACCCCGAC GCGGTGGGCG CGGGGGGGCA GGCCTTCCTG
CTGCGCCAGA CCGGGCGGGC GGACATGGAG ACCCTGCGCG CGGACATGGC CGCGGGGGCG
GACGCGGCCG CCGAGGTGAT CGTGGCGGTG CTGACGCGCT GGCAGGGGTG A
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| Protein sequence | MTFETRMTRL PLPFDPERGA AAVAAHCPEA TGTLRDALVG MAGSSPYLEG LLAKEAAWFA
AALEDPEAAF AQILAEVPEI APDQIKPGLR VAKRRVALLA GFADLAGVWP LEAVTENLTL
FADATMGAAL RAALAPELRR GKVPGQGEAD LPEAAGMVML AMGKMGAFEL NYSSDIDLIC
LFDQDRFAPD AFGEARAAFV RATRRAVGIM SDPTGDGYVF RTDLRLRPDP SVTPVCIAME
AAERYYESLG RTWERAAHIK ARPAVGDLEA GAGYLARLTP FIWRKHLDFA AIEDAHDMRL
RIRAHKGLHG PVSLPGHDMK LGKGGIRDIE FFTQTRQIIS GGRDPDLRVR GTVAGLAVLA
EKGWVRPEDA AVLSDHYRAH REVEHRVQMI ADAQTHALPK DDDGFRRLAC LTGEADVAGW
RRQLKDRLAE VAALTEPFFA PERSASSPPP EAVPEGAAEV MERWRSYPAL RSTRALEIFG
RLRPEILSRL GRAARPDEAL LNFDSFIKGL PAGVQLFSLF EANPSLIDLI VDICATAPLL
SRYLAANSGV LDAVIGGPFF ADWPGEAALA AELEARLAPL DDYEHQLDAA RRWQKEWHFR
VGVHHLRGLV DAQVAAEQYT DLAETVVSVL WPRVAAELSR RHGPPPGRGA VFVGMGSLGA
RTLTAQSDLD AIVVYDGAGV EASEGRRPLA PGPYYAKLTK AMITALTAPM AEGRLYEIDM
RLRPSGRQGP VATSWSAFQS YQESDAWTWE HLALTRARVI GGAGPESGAL AEDLEAFRCA
LLRSKGPGRQ AEVARDVADM RARLEAAKPA ERPFEAKQGP GRLQDIELLG QAAALLSGAE
CADTRLQLAA GVAAGCLGPE EAAVLTGQLA LLRQVQTSVR LLTDGALDPD AVGAGGQAFL
LRQTGRADME TLRADMAAGA DAAAEVIVAV LTRWQG
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