| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1758 |
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| Symbol | ccmE |
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| ID | 5713325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1821878 |
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| End bp | 1822360 |
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| Gene Length | 483 bp |
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| Protein Length | 160 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641267676 |
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| Product | cytochrome c-type biogenesis protein CcmE |
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| Protein accession | YP_001533101 |
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| Protein GI | 159044307 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2332] Cytochrome c-type biogenesis protein CcmE |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGGTC TGAAGAAGAA ACGCCGGATC CAGATCATCG CCATCGCGGC CGTGGCGCTG
ACCATTGCGA CCATCATGAT CGGCACGGCC ATGCGCGACG GGATCAACTT CTTCCGCTCG
CCCAGCGAAG TGGCAGAAGC GCCGCCGCCC GAGTCCGAGG TGTTTCGCAT CGGCGGTCTT
GTAGAAGAGG GCACTCTGGT GCGCGGCGAG TCCGAGACAA CCACCTTCAT GGTGACCGAC
GGCGGCGCGT CCATCCCGGT CAGCTACACT GGCGTTCTGC CGGATCTCTT TGGCGAAAAC
GAGGGCACCG TGGCGCTGGG GTCGATGCAG AACGGCGTGT TCATGGCGAC CGAGGTGCTC
GCACGCCACG ACGAGACCTA CATGCCGAAG GAAGTCGTCG ATGCGCTCAA GGAGCAGGGG
GTCTACAAGG ATCCGAACGC GACCGATGCG GACGGCGGCT ACGGCGGGGC CAGCGGTTCC
TGA
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| Protein sequence | MRGLKKKRRI QIIAIAAVAL TIATIMIGTA MRDGINFFRS PSEVAEAPPP ESEVFRIGGL
VEEGTLVRGE SETTTFMVTD GGASIPVSYT GVLPDLFGEN EGTVALGSMQ NGVFMATEVL
ARHDETYMPK EVVDALKEQG VYKDPNATDA DGGYGGASGS
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