Gene Dshi_1753 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1753 
Symbol 
ID5713320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1819173 
End bp1819949 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content67% 
IMG OID641267671 
Productenoyl-CoA hydratase 
Protein accessionYP_001533096 
Protein GI159044302 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.228549 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTATC AGACCATCAC CCTGACCATC GAGGACGACG CGGCGGTCCT GACCCTGAAC 
CGGCCGGACG TGATGAATGC GCTCAACAGC CAGATGCGTG CCGAGATCAC CGATGCGGTG
AAGCTCGCCG GGGCGGAGGC GCGGGTACTG GTGATGACCG GGGCCGGGCG GGCGTTCTGC
TCGGGCCAGG ACCTGGGCGA CCGGGCTAAT GCGGCAAATC TCGATCTCGA ACGAACCCTG
CGCGACGAAT ACGTGCCCAT GCTGCGCGCG ATCTTCGACT GCCCGGTGCC GACCATCGCG
GCGGTCAACG GGCCTGCGGC GGGGGCGGGG GCGAACCTGG CGCTGGCTGC GGATGTGGTC
ATCGCGACGG AAAGTGCGGT GTTCCTGCAG GCCTTCACCC GGATCGGCCT GATCCCGGAT
GCGGGCGGGA CCTACTGGCT TCCGCGGCAG ATGGGCTTTG CCAAGGCGAT GGGAGCCGCG
CTTTTCGCCG ACAAGATCAC CGCGCGCCAG GCCGACGCCT GGGGCATGAT CTGGGAGGCT
GTGCCCGATG CGGAATTCGA GGCGGTCTGG CGCGCTCGTG CGGCCCATCT CGCCAAGGGA
CCGACCGCCG CCTACGAGGC AGTCAAGCAA GCCCTGCGCG ACAGTTTCAA CAACGATCTC
GACGGGCAAC TGGCGCTGGA GGCGAAGCTT CAGGGCAAGA TGGGCGAGAC CCGCGATTTC
AAGGAGGGCG TGCTGGCCTT TCTGGAAAAA CGCTCGGCCT CCTTCGAGGG GCGCTGA
 
Protein sequence
MSYQTITLTI EDDAAVLTLN RPDVMNALNS QMRAEITDAV KLAGAEARVL VMTGAGRAFC 
SGQDLGDRAN AANLDLERTL RDEYVPMLRA IFDCPVPTIA AVNGPAAGAG ANLALAADVV
IATESAVFLQ AFTRIGLIPD AGGTYWLPRQ MGFAKAMGAA LFADKITARQ ADAWGMIWEA
VPDAEFEAVW RARAAHLAKG PTAAYEAVKQ ALRDSFNNDL DGQLALEAKL QGKMGETRDF
KEGVLAFLEK RSASFEGR