| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1752 |
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| Symbol | mmsB |
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| ID | 5713319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1818236 |
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| End bp | 1819111 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641267670 |
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| Product | 3-hydroxyisobutyrate dehydrogenase |
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| Protein accession | YP_001533095 |
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| Protein GI | 159044301 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
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| TIGRFAM ID | [TIGR01692] 3-hydroxyisobutyrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.526559 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCG GGTTTGTAGG CTTGGGCAAC ATGGGCGCAC CGATGGCGCG CAACCTGGCT
GCCGCGGGCC ATGCGGTCAC GGGGTTCGAC CTGACCGCCC CGGTGCCCGA GGGCGTGACC
GGGGCCGCCA GTGCCGCCGA AGCCGCCGCA GGCGCGGAGG TGGTCATCAC CATGCTGCCC
AACGGTGCGA TCCTGCGCAG CGTGGCGGCC GAGCTGATCC CGGCCATGGC GCCGGGTGCG
GTGCTGCTGG ATTGCTCGAC CGTGGATGTC GAAAGCGCCC GCGCCGTGGC GGCGCAGGCC
GAGGCGGCGG GCCTTGGCGC GTTGGATGCG CCCGTCTCCG GCGGGACCGG CGGGGCCGAG
GCCGGCACGC TGACCTTCAT GGTGGGGGGC AGTGACGCGG CCTTTGCCAC GGCGAGGCCG
CTCTTTGATA TCATGGGCCA GAAGGCGGTC CATTGCGGCG GGGCGGGCAA TGGCCAGGCT
GCGAAGATCT GCAACAACAT GATCCTCGGG GTCACCATGG TCGCCACCTG CGAGGGGTTC
GCGTTGGCCG ACAAGCTGGG CCTCGACCGG CAGGCGCTAT TTGACGTGGT CTCGACCTCC
TCGGGCTACA GCTGGTCGAT GAACGTCTAC TGCCCCGCGC CCGGGATCGG ACCCGAAAGC
CCCGCGGACC GGGACTACGC GCCCGGGTTT GCCGCGGAGC TCATGCTCAA GGACCTGCGC
CTGAGCCAAC AGGCCGCCGA GGCGGTGGAT GCCGACACCC CCACCGGGGC CACGGCGACC
GCCCTTTTCG AGACATTTGT CGAGACCGAG GGCATGGGAA AGAAGGATTT CACCGCGATC
CTTCCGCGGT TTGCGGCCAA GGGGCGCGCG AGCTGA
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| Protein sequence | MKIGFVGLGN MGAPMARNLA AAGHAVTGFD LTAPVPEGVT GAASAAEAAA GAEVVITMLP
NGAILRSVAA ELIPAMAPGA VLLDCSTVDV ESARAVAAQA EAAGLGALDA PVSGGTGGAE
AGTLTFMVGG SDAAFATARP LFDIMGQKAV HCGGAGNGQA AKICNNMILG VTMVATCEGF
ALADKLGLDR QALFDVVSTS SGYSWSMNVY CPAPGIGPES PADRDYAPGF AAELMLKDLR
LSQQAAEAVD ADTPTGATAT ALFETFVETE GMGKKDFTAI LPRFAAKGRA S
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