Gene Dshi_1745 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1745 
Symbol 
ID5713312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1810852 
End bp1811286 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content64% 
IMG OID641267663 
Producthypothetical protein 
Protein accessionYP_001533088 
Protein GI159044294 
COG category[T] Signal transduction mechanisms 
COG ID[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.87888 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGTGC ATCAGATCCT GAAGTCGAAG GCGAGCGCGG AGGTGGTGAC GATCGGTCCG 
GACGCCAGCG TCGCGGACGC CGCCAAGGTG CTCTCGCTGC GCAAGATCGG GAGCGTGGTC
GTCTCTTCCA ACGGCAAGAC CGCCGACGGG ATCCTGTCCG AGCGCGATAT CGTGCGCGAG
GTGGGGGTGC GCGGGGCAGG CTGCCTGACC GAGACCGTTG GCAACATGAT GACACGGGAT
CTTGTCACCT GCGGCCCGGA TGAAAGCGCC GACAAGGTGC TGATGCAGAT GACCGAAGGA
CGCTTCCGCC ACATGCCCGT GGTTCAGGAC GGCGAAATGA TCGGCCTGAT CACCCTGGGC
GACGCGGTCA AGGCGCGGCT GCAGGAAGTC AGCATGGAAA AAGAGGCGCT CGAAGGGATG
ATCATGGGGT TCTGA
 
Protein sequence
MLVHQILKSK ASAEVVTIGP DASVADAAKV LSLRKIGSVV VSSNGKTADG ILSERDIVRE 
VGVRGAGCLT ETVGNMMTRD LVTCGPDESA DKVLMQMTEG RFRHMPVVQD GEMIGLITLG
DAVKARLQEV SMEKEALEGM IMGF