| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1742 |
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| Symbol | gap1 |
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| ID | 5713309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1808288 |
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| End bp | 1809310 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641267660 |
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| Product | glyceraldehyde-3-phosphate dehydrogenase 1 |
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| Protein accession | YP_001533085 |
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| Protein GI | 159044291 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.428275 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.762797 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGAGC GAGGGGCGCA GATGACTGTG CAAGTGGCAA TCAATGGGTT CGGCCGGATC
GGTCGTAATG TCCTGCGGGC GATTCTCGAA ACTGAGGATA GCGGGCTGGA GGTCGTGGCG
ATCAACGATC TGGGCCCGGT GGAAACCAAT GCGCATCTGT TGCGCTACGA TTCGATCCAT
GGCCGCTTCC CCGGGACGGT CACCGTGTCC GGCGACACGA TCGATGTGGG GCGTGGCCCG
ATCAAGGTCA CCGCGATCCG CAATCCCGAG GACCTGCCCT GGTCCCATGT GGATATCGTG
CTGGAATGCA CCGGTATCTT CACCGCCCGC GACAAGGCTG CCCTGCACCT CAAGAACGGC
GCCAAACGTG TGCTCGTGTC GGCCCCGGCG GCCGGTGCGG ACAACACCAT CGTCTACGGG
GTGAACCACA AGAGCCTGTC GGGCTCGGAC ATCGTGGTCT CGAACGCCTC CTGCACCACC
AACTGCCTGG CGCCCGTCGC CTCGGTGTTG CAAGAGGCCG TGGGCATCGT GAAGGGGTTC
ATGACCACCA TTCACAGCTA CACAGGCGAC CAGCCGACGC TGGACACGAT GCACAAGGAT
CTCTACCGCG CACGGGCGGC GGCGATGAAC ATGATCCCGA CCTCCACCGG GGCGGCACGG
GCCGTGGGCC TGGTGCTGCC GGAGCTGAAC GGCAAGCTCG ACGGGGTGGC AATCCGGGTG
CCGACGCCGA ACGTGTCGGT CGTCGACCTG ACCTTCAAAG CCGCGCGCGA GACCTCGGTC
CAAGAGATCA ACGCGGCGAT CCATGCGGCC GGCGAAGGAC GGCTTGCGGG GGTTCTCGGC
GTGACCGACG AGAAGCTCGT GTCGATGGAT TTCAACCACG ACGCCCATTC GTCGATCTTC
GCCACGGACC AGACCAAGGT GCTGGAAGGC ACCATGTGCC GGGTGCTGAG CTGGTATGAC
AACGAGTGGG GCTTCTCGAA CCGGATGGTC GACACCGCCC GGGAGATGGG CAAGTTCCTC
TGA
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| Protein sequence | MKERGAQMTV QVAINGFGRI GRNVLRAILE TEDSGLEVVA INDLGPVETN AHLLRYDSIH
GRFPGTVTVS GDTIDVGRGP IKVTAIRNPE DLPWSHVDIV LECTGIFTAR DKAALHLKNG
AKRVLVSAPA AGADNTIVYG VNHKSLSGSD IVVSNASCTT NCLAPVASVL QEAVGIVKGF
MTTIHSYTGD QPTLDTMHKD LYRARAAAMN MIPTSTGAAR AVGLVLPELN GKLDGVAIRV
PTPNVSVVDL TFKAARETSV QEINAAIHAA GEGRLAGVLG VTDEKLVSMD FNHDAHSSIF
ATDQTKVLEG TMCRVLSWYD NEWGFSNRMV DTAREMGKFL
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