Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1740 |
Symbol | gap2 |
ID | 5713307 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 1807000 |
End bp | 1808001 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641267658 |
Product | glyceraldehyde-3-phosphate dehydrogenase |
Protein accession | YP_001533083 |
Protein GI | 159044289 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.168676 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.735809 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATTA CAGTTGGAAT CAACGGATTT GGCCGCATCG GTCGCTGCAC CCTGGCGCAT ATCGCGGAAA GCGCGCGCAA CGATGTGCAG GTGGTCAAGA TCAACGCCAC GGGTCCGATC GAAACGAATG CGCATCTGCT CAAGTATGAC AGCATCCATG GCCGGTTCGG CGGCACGGTC ACGGTGGATG GCGACCACAT GGACCTGGGC CGCGGACCGA TGAAGGTGTT CTCCACCTAT GATCCGACGG AGCTGGACTG GTCCGGGGTG GACGTGGTGC TGGAATGCTC GGGCAAGTTC AACGCCCGCG ACAAGGCGGC GGTCCATCTG GACCACGGCG CCAAGCGTGT GCTGGTCTCC GCCCCTGCCA AGAACGCCGA CAAGACCATC GTCTACGGGG TGAACCACCG CAGCCTGACC AAGGACGATC ACGTGGTCTC CAACGCCTCC TGCACCACCA ACGGGCTGGC CCCGCTGGCC AAGGTCCTCA ACGACGCGAT CGGGATCGAG CGTGGCATCA TGACCACGAT CCACAGCTAT ACCGGAGATC AGCCGACGCT GGACCGGCGG CATTCCGACC TGTACCGCGC TCGCGCTGCG GCCATGGCGA TGATCCCCAC CTCCACCGGG GCGGCGAAGG CCATCGGCGA GGTGATCCCC GAACTCGCCG GCAAGCTCGA CGGCACCGCC CTGCGGGTGC CCACGCCGAA CGTCTCGGCG GTGGACCTGA CCTTCGAGGC GGGCAAGGAT GTGACCGTCG AGGACGTGAA CGAGATCGTG CGCGAGGCGG CCCAGGGCCA TATGGGCGCG GTTCTGGCCT ATGACCCGGA GCCGAAGGTG TCGATCGACT TCAACCACAC CACCCATTCC TCGATCTTTG CACCGGACCA GACAAAGGTT ATCGGGGGAC GGACCGTGCG GGTTCTGGCA TGGTACGACA ATGAATGGGG CTTCTCTTGC CGCATGGCGG ACACCGCCGC GGCCATCGGA CGCCTGATCT GA
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Protein sequence | MTITVGINGF GRIGRCTLAH IAESARNDVQ VVKINATGPI ETNAHLLKYD SIHGRFGGTV TVDGDHMDLG RGPMKVFSTY DPTELDWSGV DVVLECSGKF NARDKAAVHL DHGAKRVLVS APAKNADKTI VYGVNHRSLT KDDHVVSNAS CTTNGLAPLA KVLNDAIGIE RGIMTTIHSY TGDQPTLDRR HSDLYRARAA AMAMIPTSTG AAKAIGEVIP ELAGKLDGTA LRVPTPNVSA VDLTFEAGKD VTVEDVNEIV REAAQGHMGA VLAYDPEPKV SIDFNHTTHS SIFAPDQTKV IGGRTVRVLA WYDNEWGFSC RMADTAAAIG RLI
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