| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1731 |
|---|
| Symbol | |
|---|
| ID | 5713298 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | - |
|---|
| Start bp | 1798047 |
|---|
| End bp | 1798658 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641267649 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001533074 |
|---|
| Protein GI | 159044280 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0545738 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGATCAT CGAAATCCCG CTCGCGGAAC AAGAATAACC GGCGCAGTGT CGGCAATATC
GTCAACCGTG TATTCGACAG TTCCGGGCCA GAGGGCAAGG TGCGCGGCAC GCCGCAGCAG
ATCATCGACA AATACCTGAC CCTGGCGCGG GATGCGCAAT TGGCCAATGA CCGCGTCGCG
GTGGAGAATT TCCAGCAGCA CGCCGAGCAT TACACCCGCA TGCTGAGCGA GGCCATGCGC
GAGCAGGAGG CCCGCCAGGA ACAGCAGGCG CAGCAAGCCC AGAACCAGCA GAAATCGCGC
GGCGACCGCA ACGAACGCGG TGATCGCGGC CAGAGCGGGC AGGGCGGGCA AGGCGGCGAC
CAGCCGTCGC AGGGCCAGTC CCGCTCCGAT CCCGGCGACG CGCCCCAGCC CGAGACGGCC
GAAGCCAAAC CGCCCGAGAC CGGCGCGTCC GATGTGATCG ACCTGGGCGA CGGCGACACC
GATACGGGGC TCGTCGAGAC CCCCGAAAGC AAACCCGCCC GCAAGCCGCG CACCCGCTCG
CGCCGCAAGA AGACCGACGA AGCGCCCGCC GAAACGGCCG AGGCCTCGTC CGAGACACCG
GCGGCGGAAT AA
|
|---|
| Protein sequence | MRSSKSRSRN KNNRRSVGNI VNRVFDSSGP EGKVRGTPQQ IIDKYLTLAR DAQLANDRVA
VENFQQHAEH YTRMLSEAMR EQEARQEQQA QQAQNQQKSR GDRNERGDRG QSGQGGQGGD
QPSQGQSRSD PGDAPQPETA EAKPPETGAS DVIDLGDGDT DTGLVETPES KPARKPRTRS
RRKKTDEAPA ETAEASSETP AAE
|
|---|
| |