| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1728 |
|---|
| Symbol | argS |
|---|
| ID | 5713295 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | - |
|---|
| Start bp | 1794601 |
|---|
| End bp | 1796346 |
|---|
| Gene Length | 1746 bp |
|---|
| Protein Length | 581 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641267646 |
|---|
| Product | arginyl-tRNA synthetase |
|---|
| Protein accession | YP_001533071 |
|---|
| Protein GI | 159044277 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0018] Arginyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00456] arginyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.231273 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.529501 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTGT TTACCGATAT CCGCGCGGGC GTTCTGGCCG CCCTGACCGA GATGCAAGCC
GAGGGCACGC TGCCCGAGGG GCTCGACTTC GCCAATGTGA CCGTCGAGCC ACCGCGCGAC
GCCGCCCATG GCGACATGGC GACCAATGCC GCAATGGTGC TCGCCAAACC CGCGAAGATG
AAGCCGCGTG ACATCGCCGA GGCACTCGCC GGCAAGCTCG CCGCCGACCC CCGGGTCGCC
AGCGCCGAGG TGGCGGGCCC CGGCTTTCTG AACCTGCGCC TGGCGCCCAC GCTCTGGCAG
GACGTGGTGC GTGCGGTGCT GACCACCGGC ACCGGCTTTG GCCGGTCGAG CATGGGGCAG
GGGCGGCGGG TCAACGTGGA ATACGTCTCC GCCAACCCCA CCGGGCCCTT GCATGTGGGC
CATACGCGCG GCGCGGTCTT CGGCGATGCC CTGGCCAGCC TGCTGGATTT CGCGGGCTAC
GACGTGACCC GCGAATACTA CATCAACGAT GGCGGTGCGC AGGTCGATGT GCTCGCGCGG
TCGGTCTACC TGCGCTACCT GGAGGCCCAC GGCCAGCAGG TCGCCTTCGA GGACGGCACC
TATCCCGGCG ACTACCTGAT CGCCGTGGGC GAGGCGCTCA AGGACAAGGT CGGCGACGCC
TTCGTGGACA AGGGAGAGCA GTTCTGGCTC GCAGAGGTGC GCGATTTCGC CACCGACGCC
ATGATGGACC TGATCCGTGC CGATCTCGCC AGCCTCGGCG TCAAGATGGA CCGGTTCTTC
TCGGAAAAGA GCCTCTACGG CACCGGCCGG ATCGAAGCCG CCATCGCCGA TCTGGACGCC
AAGGGCCTGA TCTATCGCGG CACGCTGGAG CCGCCCAAGG GCAAGGTGCC GGAGGATTGG
GAGCCGCGCG AACAGACCCT GTTCCGCTCC ACCGCCCACG GCGACGATGT GGACCGCCCG
ATCAAGAAAT CCGACGGCAG CTGGACCTAT TTCGCCCCCG ACATCGCCTA TCACTACGAC
AAGGTGAACC GCGGCTATGA CGCGCTGATC GACGTGTTCG GCGCCGACCA CGGTGGCTAT
GTCAAACGGA TGAAGGCGGC GGTCTCGGCG CTGTCGGACG GCAAGACCCC GCTCGACATC
AAGCTGACGC AGCTTGTGCG GCTCTTCAAG AATGGCGAGC CGTTCAAGAT GTCCAAGCGC
GCGGGCACCT TCGTGACGCT CTCGGACGTG GTCGAGCAGG TCGGCCCGGA CGTCACGCGC
TTCGTGATGC TGACCCGCAA GAACGACGCG CCGCTCGATT TCGACTTCGA CAAGGTGTTG
GAGCAGTCCC GCGAAAACCC CGTGTTCTAC GTTCAATACG CCCATGCCCG GGTCTGCTCG
GTGCTGCGCA AGGCCGCCGA GGCCGGAGTC CCAGTGGACG ACGCCAACTT GGCCCAAGCC
GACCTGTCGG GCATGACCGA CCCGGCGGAG CTGAAGCTCG CCCGCGCGCT GGCCGAATGG
CCGCGCCTGG TCGAGATCGC CGCCCGCACC AACGAGCCGC ACCGAATCTC CTTCGCACTC
TACGACATCG CCGCCGATCT CCATGCGCTG TGGAACAAGG GCAATGACGA TCCGTCGTTG
CGTTTCCTGC AAGAGGGTGA CTCAGCTGCA ACACAGGCGA AAATCGCCCT CGTGCGCGCC
TGCGCCGTTG TTATTTCGAC CGGTCTTGGT ATCCTTGGCG TGTCTCCGGT GGAAGAGATG
CGCTGA
|
|---|
| Protein sequence | MNLFTDIRAG VLAALTEMQA EGTLPEGLDF ANVTVEPPRD AAHGDMATNA AMVLAKPAKM
KPRDIAEALA GKLAADPRVA SAEVAGPGFL NLRLAPTLWQ DVVRAVLTTG TGFGRSSMGQ
GRRVNVEYVS ANPTGPLHVG HTRGAVFGDA LASLLDFAGY DVTREYYIND GGAQVDVLAR
SVYLRYLEAH GQQVAFEDGT YPGDYLIAVG EALKDKVGDA FVDKGEQFWL AEVRDFATDA
MMDLIRADLA SLGVKMDRFF SEKSLYGTGR IEAAIADLDA KGLIYRGTLE PPKGKVPEDW
EPREQTLFRS TAHGDDVDRP IKKSDGSWTY FAPDIAYHYD KVNRGYDALI DVFGADHGGY
VKRMKAAVSA LSDGKTPLDI KLTQLVRLFK NGEPFKMSKR AGTFVTLSDV VEQVGPDVTR
FVMLTRKNDA PLDFDFDKVL EQSRENPVFY VQYAHARVCS VLRKAAEAGV PVDDANLAQA
DLSGMTDPAE LKLARALAEW PRLVEIAART NEPHRISFAL YDIAADLHAL WNKGNDDPSL
RFLQEGDSAA TQAKIALVRA CAVVISTGLG ILGVSPVEEM R
|
|---|
| |