Gene Dshi_1725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1725 
Symbol 
ID5713292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1791755 
End bp1792549 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content66% 
IMG OID641267643 
Productputative Segregation and condensation protein A 
Protein accessionYP_001533068 
Protein GI159044274 
COG category[S] Function unknown 
COG ID[COG1354] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.608158 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.510432 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA GCCAACCCGA CCTGAACCTG TCCCCCGCCA GCGTCGAGGA GCGTCTCGCC 
GCCGAGGCGC TGATCGTGGA CGTGGATGGG TTCGAGGGGC CGCTCGACCT GCTGCTGCAA
CTCTCGCGCA CCCAGAAGGT CGATTTGCGC AAGGTCTCGG TGCTGGCCCT GTCCGAACAA
TATCTCGCCT TCATCGAGAA GGCGAAAGCG CTGCGGATCG AACTGGCTGC CGACTACCTG
GTGATGGCCG CCTGGCTCGC CTTCTTGAAA TCCCGCCTCC TGCTGCCGCC CGACCCGGCC
GACGAGGGGC CGTCGGGCGA AGACCTCGCC GCCCATCTCG CGTTCCAGCT CGAGCGGCTC
GAGGCGATGC GCGAAGCGGC GGCCAAACTC ATGGCCCGCG ACCAGCTCGG CAAGGATTTC
TTCGCCCGTG GCACCCCCGA ACAGGTGACC CGCGCCCGGC GCGTGACCTA TTCCGCGACC
CTGATCGACC TGATGCAGGC CTATGCCCGG ATCCGCACCA AGGACGATTT CCGCCCCTTC
GTCTTCGACC GTGACAGCGT GCTGACCATG GAACAGGCGC TCGACCGGAT GAAAACCATG
GTCCGTTTTG CGGGCGACTG GACTGACCTC GCGGCCTACC TGCCCGAAGG CTGGATCAAC
GACCCCAAGC GCCGCCGCTC CGCCACCGCC GCCACCTTCG CCGCCTCGCT GGAGCTTGCC
AAGGCGGGCA AGATCGAACT GCGCCAGGGC GAGACCTTCG CCCCCATTCA ACTCAAACGC
AAATCCGAGC CGTGA
 
Protein sequence
MTDSQPDLNL SPASVEERLA AEALIVDVDG FEGPLDLLLQ LSRTQKVDLR KVSVLALSEQ 
YLAFIEKAKA LRIELAADYL VMAAWLAFLK SRLLLPPDPA DEGPSGEDLA AHLAFQLERL
EAMREAAAKL MARDQLGKDF FARGTPEQVT RARRVTYSAT LIDLMQAYAR IRTKDDFRPF
VFDRDSVLTM EQALDRMKTM VRFAGDWTDL AAYLPEGWIN DPKRRRSATA ATFAASLELA
KAGKIELRQG ETFAPIQLKR KSEP