Gene Dshi_1720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1720 
SymbolfabH 
ID5713286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1787238 
End bp1788212 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content68% 
IMG OID641267637 
Product3-oxoacyl-[acyl-carrier-protein] synthase 3 
Protein accessionYP_001533063 
Protein GI159044269 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.421213 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.298986 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTAAAC GTGCAGTCGT CACCGGTGTG GGGCATTACC TTCCAAGCCG CGTGGTCCCG 
AATTCCGAAC TCGAAACCCT GGTCGACACG ACCGATGAAT GGATCCGTAC CCGCTCGGGC
ATCGAGCGGC GCCATTTCGC AGCGGACGGG GAACAGACCT CGGACCTTGC CACCGCCGCC
GCGCAAGCGG CACTCGACCA TGCCGAGCTG ACCGCACAGG ATGTGGACGC GGTGATCGTG
GCGACCTCCA CCCCCGATCT GACCTTCCCG GCCGTGGCCA CCATGGTGCA GGCCCGGCTC
GGCATGACCC GGGGGTTTGC CTATGACGTG CAGGCGGTCT GCGCCGGGTT CGTGTTCGCC
ATGGCCAATG CCAACGCGAT GATCCTGTCG GGCCAGGCCG ACCGGATCCT GGTGATCGGG
GCCGAGACCT TCAGCCGAAT CATGGACTGG ACCGACCGGT CGACCTGCGT GCTCTTCGGC
GACGGCGCGG GTGCCGTGGT GCTGGAGGCG CGCGACGGCA CCGGTGGGAC GGCCGACCGC
GGGATCCTGT CGGCGGACCT GAATTCCGAC GGGCGGCACC GCGATATCCT TTACGTGGAT
GGGGGCGTGT CCAGCTCGCA AACCGCGGGC TACCTGCGGA TGGAGGGCAA GGAAGTGTTC
CGCCACGCCA TCGAGAAGCT CGCCGCGACC GCCGAGACCG CGCTCGCCAA GGCCGGTCTG
ACAGAGGCGG ATGTGGACTG GGTCGTGCCC CACCAGGCCA ACCTGCGCAT CATCACCGCC
ACCGCGCGCA AGATGGGCAT CGGCATGGAC CGGGTCGTCG TCACCGTGGC CGATCACGGC
AACACCTCGG CCGCGTCGAT CCCCATGGCG CTGTCGGTCG GGGTGGCGCG CGGGCAGATC
AAGCCCGGCG ATCTGGTCGT CACCGAGGCC ATCGGGGGCG GATTGTCCTG GGGATCGGTG
GTATTACGCT GGTAA
 
Protein sequence
MGKRAVVTGV GHYLPSRVVP NSELETLVDT TDEWIRTRSG IERRHFAADG EQTSDLATAA 
AQAALDHAEL TAQDVDAVIV ATSTPDLTFP AVATMVQARL GMTRGFAYDV QAVCAGFVFA
MANANAMILS GQADRILVIG AETFSRIMDW TDRSTCVLFG DGAGAVVLEA RDGTGGTADR
GILSADLNSD GRHRDILYVD GGVSSSQTAG YLRMEGKEVF RHAIEKLAAT AETALAKAGL
TEADVDWVVP HQANLRIITA TARKMGIGMD RVVVTVADHG NTSAASIPMA LSVGVARGQI
KPGDLVVTEA IGGGLSWGSV VLRW