| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1719 |
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| Symbol | plsX |
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| ID | 5713285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1786088 |
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| End bp | 1787245 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641267636 |
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| Product | putative glycerol-3-phosphate acyltransferase PlsX |
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| Protein accession | YP_001533062 |
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| Protein GI | 159044268 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0416] Fatty acid/phospholipid biosynthesis enzyme |
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| TIGRFAM ID | [TIGR00182] fatty acid/phospholipid synthesis protein PlsX |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.171532 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0968496 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCAG GGACATCGAT CGGCACGACG CCCGGCGGGT CCACTTCCCC GGAAACTCCG
CCTGAGCATG GGCTGACGGG GACGGTGATC TCCGTCGACG CCATGGGGGG CGACACGGGC
CCGGCGGCGG TGGTCGGCGG GCTGGCTATT GCGGCCGAGA AAAACCCCGA CATTGCCTTT
CTGCTTCACG GTGACGCCAC CGAGTTGACC GCGCTCGTTG CGAAACGGCG TGCGCTCGAC
GGCCGCGTGG CGATCCGCGG CACGTCCGAC GTAGTGACCA TGCACGACAA GCCGAGCCAG
GTCATGCGCG GCGGCAAGGA CACCTCCATG TGGTCAGCCA TCGACGCCGT GCGCAACGGC
GAGGCGACGG TCTGTGTCTC CTGCGGCAAC ACCGGCGCGC TCATGGCGCT GTCGATGGTG
CGCCTGCGCA AGGTGCCCGG CATCAACCGC CCCGCCATCG CCTGCCTCTG GCCGTCGCGC
GCCAAGTCCG GGTTCAACGT GATGCTGGAC GTGGGCGCCG ACATCAAGGC CGACGCGCAG
GACCTGCTGC AATACGCGCT GATGGGCGCG TCCTATGCCC GCAACGGGCT GGGCAATCCC
ACCCCGCGCA TCGGTCTGCT CAATGTCGGC ACCGAAGAGC ACAAGGGCCG GGCCGAGCTG
AAGGCAGCCC ATGACCTGAT CGCCCAGGCC GCGCCCGACA ATGATTTCGA GTTCGTGGGC
TTCGTCGAAG GCGGCGACAT CCCGTCGGAC AAGGTGGACG TGATCGTCAC CGACGGGTTC
ACCGGCAACG TGGCGCTCAA GACCGCCGAG GGCACCGCGG CCCTGATCCG CGATTTCCTG
ACCCAGGCCT TCGAGAAGAC GCCCTGGTCC AAGATCGCGG CGATGCTCGC CTATACCTCC
CTGCGGCGCC TGTCGAAACG GATCGACCCG CGCCGGGTCA ATGGCGGCGT GTTCCTGGGG
CTCAACGGCA CGGTGGTCAA ATCCCACGGC TCGGCGGATG CCACCGGGGT CGCCGCCGCC
ATCAAGCTGG CCTTCATCCT GGCGCAATCG GGCTTCACCG AGCGCCTCGC CGCGCGGGTG
GCCTCCGCCG GGCGCGCCCG CGCGAGCGGC GCCGCCACAC CAGAAGAAGA AGCAGTATCG
GGTTCCGCGA ATGGGTAA
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| Protein sequence | MAAGTSIGTT PGGSTSPETP PEHGLTGTVI SVDAMGGDTG PAAVVGGLAI AAEKNPDIAF
LLHGDATELT ALVAKRRALD GRVAIRGTSD VVTMHDKPSQ VMRGGKDTSM WSAIDAVRNG
EATVCVSCGN TGALMALSMV RLRKVPGINR PAIACLWPSR AKSGFNVMLD VGADIKADAQ
DLLQYALMGA SYARNGLGNP TPRIGLLNVG TEEHKGRAEL KAAHDLIAQA APDNDFEFVG
FVEGGDIPSD KVDVIVTDGF TGNVALKTAE GTAALIRDFL TQAFEKTPWS KIAAMLAYTS
LRRLSKRIDP RRVNGGVFLG LNGTVVKSHG SADATGVAAA IKLAFILAQS GFTERLAARV
ASAGRARASG AATPEEEAVS GSANG
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