| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1701 |
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| Symbol | |
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| ID | 5713267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1770402 |
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| End bp | 1771202 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641267618 |
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| Product | putative high-affinity zinc uptake system membrane protein |
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| Protein accession | YP_001533044 |
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| Protein GI | 159044250 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.000503505 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0364016 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCTGG ACGATTTCAT GACCCGCGCG ACGCTGGCCG GGGTCGGTGT AGCCTTTGCC
GCGGCCCCGC TGGGCTGTTT CGTGGTGTGG CGGCGGATGG CCTATTTCGG GGATGCCACC
GCCCATGCGG CGATCCTGGG CGTGGCGCTG TCGCTGGCGC TGCAGATGTC GATTTTCGCA
GGCGCGGTTC TGGTGGCGCT GCTCATGGCG CTGACGGTGA CGTACCTGGC CGGGCGGGGC
TATGCGATGG ACACGCTGCT GGGGGTGATG GCCCATTCGG CGCTGGCCTT CGGGCTGGTG
GCGGTGTCGT TCCTGTCGGG GGTGCGGATC GACCTGATGG CGTATCTGTT CGGTGATATC
CTGTCGGTGT CGCGCATGGA CCTGGTGGTG ATCTGGGGTG GCGCGGCCCT GGTTGTGGGA
CTGATCCTGT GGCGATGGGC GGCGCTGCTG ACGGCGACCC TGAACGAGGA GCTGGCCTAT
GCCAGCGGGC TCGATCCGCG GCGCGAACAG CTGGTGCTGA CGGTGGCGCT GGCGATCACG
GTGGCGGTGG CGATCAAGGT GGTGGGCGTG TTGCTGATTG CGGCGATGTT GATCATTCCG
GCGGCGGCGG CCCGGGGGCT GGCGCGCACG CCGGAGGCCA TGGCGGCCAT CGCGGCGGGC
ATCGGGGCGC TGTCGGCGGT GGCCGGGTTG CGCGCGGCCT ATGTGTTCGA CACGCCCGCC
GGGCCGTCGA TCGTCTGCGT GGCCGCGCTG CTTTTTGCCG GGCTGAATCT CGCGGGCTGG
CGCAGCGCGC GGGGTGCCTG A
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| Protein sequence | MMLDDFMTRA TLAGVGVAFA AAPLGCFVVW RRMAYFGDAT AHAAILGVAL SLALQMSIFA
GAVLVALLMA LTVTYLAGRG YAMDTLLGVM AHSALAFGLV AVSFLSGVRI DLMAYLFGDI
LSVSRMDLVV IWGGAALVVG LILWRWAALL TATLNEELAY ASGLDPRREQ LVLTVALAIT
VAVAIKVVGV LLIAAMLIIP AAAARGLART PEAMAAIAAG IGALSAVAGL RAAYVFDTPA
GPSIVCVAAL LFAGLNLAGW RSARGA
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