| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1692 |
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| Symbol | cobA1 |
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| ID | 5713258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1760630 |
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| End bp | 1761475 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641267609 |
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| Product | uroporphyrinogen-III C-methyltransferase |
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| Protein accession | YP_001533035 |
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| Protein GI | 159044241 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0007] Uroporphyrinogen-III methylase |
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| TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.127844 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0407168 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACT CCCTCTTCTC CTCCCTGCCG CAGATGTCCC CGGGCTGGGT CTGGCTTTGC
GGCGCGGGGC CCGGCGATCC GGGCCTGCTG ACGCTGCACG CGGTCAATGC CCTGCGCCAG
GCGGACGTGA TCGTCTACGA CGCCCTTGTA GACGACAGGG TGCTCGGCTG GGCCAACCCG
CAGGCGGAGA AGGTCTATGC CGGCAAGCGT GGCGGCAAGC CCTCGGCCAA GCAGCGCGAC
ATCTCCCTGC GTCTGATCGC ACTGGCCCGC GAGGGCCGCC GGGTGCTGCG GCTCAAGGGT
GGCGATCCGT TCGTCTTCGG CCGCGGCGGC GAAGAGGCCC AGACCCTCGT GCAGCACGGC
ATCCCGATCC GCATCATCCC AGGCATCTCC GCCGGGATCG GAGGGCTGGC CTATGCGGGC
GTACCGGTGA CCCACCGGGA CGTGAACCAG TCCGTCACCT TCGTGACCGG CCACGACCAG
AGCGGTGCGA CCCCCTCCAC TCTCGACTGG GAGGGCATCG CCCGCGGCAG CCAGGTCATC
GTGATCTACA TGGGCATGAA GCATATCGCC CGCATCGCCG AGGCCCTGAT CGCGGGCGGC
CGCGCCCTGG ACGAACCGGT GGCCGTGGTC ACCTCCGCCG CGACCGACGC CCAGCAGGTG
CTTGAGACGA CCCTCGGCAC CGCCGCTGCG GATATCGCCC GCGCGGGCCT CGCCCCGCCC
GCGATCATCT GCGTCGGACG CGCGGTCCTG ATGCGCCAGG TCCTCGACTG GCAGTCAATG
GCCACCGGCG CCGCGCCGCG CGACCTCGAC CCCCTCGGCC GGGGCCGCCC GGCGGAGGCC
GGGTGA
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| Protein sequence | MSDSLFSSLP QMSPGWVWLC GAGPGDPGLL TLHAVNALRQ ADVIVYDALV DDRVLGWANP
QAEKVYAGKR GGKPSAKQRD ISLRLIALAR EGRRVLRLKG GDPFVFGRGG EEAQTLVQHG
IPIRIIPGIS AGIGGLAYAG VPVTHRDVNQ SVTFVTGHDQ SGATPSTLDW EGIARGSQVI
VIYMGMKHIA RIAEALIAGG RALDEPVAVV TSAATDAQQV LETTLGTAAA DIARAGLAPP
AIICVGRAVL MRQVLDWQSM ATGAAPRDLD PLGRGRPAEA G
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