| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1687 |
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| Symbol | |
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| ID | 5713253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1756672 |
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| End bp | 1757268 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641267604 |
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| Product | putative HNH endonuclease |
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| Protein accession | YP_001533030 |
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| Protein GI | 159044236 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1403] Restriction endonuclease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00321972 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0401015 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGATC TGGTAGAGCG CGAGTTCCGA ACGAGTTTCG TGCGAGACCC GCAGAGCCTG
CGTCACAATC CTGCTCTGGT GCTGAATGCC GATTATCGAC CCTTGTCGTA CTATCCCCTT
TCGCTCTGGA CCTGGCAGGA AGCTGTCAAG GCGGCTTTTC TGGAGCGGGT GACGATCCTT
GCGGAATACG ACGACGTGGT GCGCAGTCCC ACCACGGAGA TCAAAATCCC GTCGGTGGTG
GTCCTGAAAG ATTACGTCAA ACCCCAGAAG CGCGTGGCCT TCACGCGCTT CAATCTTTTC
CTGAGGGATC AATTCTGTTG CCAGTATTGC GGCGACAAGG GCGATCTGAC TTTCGACCAC
GTGGTGCCGC GCGCCTCCGG GGGCGTGACC AGCTGGGAAA ACGTGGTGGC GGCCTGTTCG
CGGTGCAACC TCAAGAAAGG GTCGAAATCC CTGCGGGCCT CGGGCATGAG CCTGCGCCAG
ACCCCGCGCC AGCCGGCGGC TGAGCAGCTG CGCAACATGG GGCGGAAGTT TCCGCCCAAC
TACCTGCACG AGAGTTGGAT GGATTTCCTC TATTGGGACG CGGAACTGGA AGCCTGA
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| Protein sequence | MSDLVEREFR TSFVRDPQSL RHNPALVLNA DYRPLSYYPL SLWTWQEAVK AAFLERVTIL
AEYDDVVRSP TTEIKIPSVV VLKDYVKPQK RVAFTRFNLF LRDQFCCQYC GDKGDLTFDH
VVPRASGGVT SWENVVAACS RCNLKKGSKS LRASGMSLRQ TPRQPAAEQL RNMGRKFPPN
YLHESWMDFL YWDAELEA
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